PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028124651.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRAS | ||||||||
Protein Properties | Length: 760aa MW: 86491.6 Da PI: 7.5743 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 376.3 | 3.8e-115 | 384 | 755 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++lL++cA+av+++d + ++lL+++++++sp gd +qRla++f+++L+arla+++s++yka+ +++ts ++ l+a++l+ +P+ k+s+ XP_028124651.1 384 LRTLLIHCAQAVAADDRRSSNELLKQIRQHSSPWGDGNQRLAHCFANGLEARLAGTGSQIYKAFVSRRTS---AADYLKAYHLYLASCPFRKISN 475 6789***************************************************************999...9********************* PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 ++ N++I +++ r+HiiDf+i +G+QWp+++q +a+R++gpp++RiTg++ p++g + +eetg+rLa++A++++vpfe+n+ +akr+++ XP_028124651.1 476 FVSNRTITVKSKSAMRLHIIDFGILYGFQWPTFIQRIAARDGGPPKIRITGIEFPQPGfrPAAGVEETGRRLADYAQTFNVPFEYNA-IAKRWDS 569 *********************************************************9*9***************************.7****** PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 ++le+L+++++E l+Vn+ ++ ++l+de+v ++s r+ v++l+++++P+++++ + +++ F++rf eal ++salfd+le+++pre++er+ XP_028124651.1 570 IKLEDLKIDRDEFLVVNCLYRSKNLHDETVLVDSSRNIVINLIRRINPDLFIHGIVNGAFSAPFFVTRFREALFHFSALFDMLETNVPREHHERM 664 *********************************************************************************************** PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 +Ere++g+e+ nv+aceg er+er et+++W+ r +aGF ++p++ +++k a +r+++ + + ++e++++l++gWk+r+++++S+W+ XP_028124651.1 665 LIEREIFGKEALNVIACEGWERVERPETYKQWQVRNLRAGFMQIPFDRDIMKRAIEKVRNHYHKDFVIDEDNQWLLQGWKGRTIYALSCWK 755 **************************************************************888*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 760 aa Download sequence |
MIMDPRLHGF SGSMNGIPLG NQSVAFSSDQ IQVGESRFRR NTFVNHKFGG IPVQPNDPSS 60 SSNVIPSSTV TLEEDPVEDC DFSDAVLTYI SQILMEEDME DKSCMLQESL DLQAAEKPFY 120 DVLGKKYPPS PEQNPIYVDQ NSESPDDCLS RNHSNCLSSS SNSSDYLVYP SWINNQADYS 180 TSQIRSPPVY DNNPSHSSVT SSNSVNKNID GFMDSPISPL QVTDLYSGNQ SIWQFRKGVE 240 EARKFLPTSN GMFINFGVNG LSPQEPKGET SEVVKVEEKK EKEYLPNESR GRKNPHREKV 300 DLEEEEERST KQPAVYPEST LRSEMFDTVL LCSMGKGEAA LIAYRKALKD GTSKKTQQNG 360 QLKGPPSRKG RGKKQNRKKE VVDLRTLLIH CAQAVAADDR RSSNELLKQI RQHSSPWGDG 420 NQRLAHCFAN GLEARLAGTG SQIYKAFVSR RTSAADYLKA YHLYLASCPF RKISNFVSNR 480 TITVKSKSAM RLHIIDFGIL YGFQWPTFIQ RIAARDGGPP KIRITGIEFP QPGFRPAAGV 540 EETGRRLADY AQTFNVPFEY NAIAKRWDSI KLEDLKIDRD EFLVVNCLYR SKNLHDETVL 600 VDSSRNIVIN LIRRINPDLF IHGIVNGAFS APFFVTRFRE ALFHFSALFD MLETNVPREH 660 HERMLIEREI FGKEALNVIA CEGWERVERP ETYKQWQVRN LRAGFMQIPF DRDIMKRAIE 720 KVRNHYHKDF VIDEDNQWLL QGWKGRTIYA LSCWKPISET |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37650.1 | 0.0 | GRAS family protein |