PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028123896.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 813aa MW: 93046.5 Da PI: 8.2821

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028123896.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.8	9.7e-20	92	185	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk+ GFs+rks+ + +k+++ ++++ + Cs+eg++ + + ++k+r ++a tr+gCka+++++ + gk++vt+++ +HnHela XP_028123896.1 92 FYNAYAKTKGFSIRKSRFNINKEEK-VVSKLWLCSREGQTLPIYLDrvAKKSRAPKALTRIGCKAQFRIRYDAdageGGKYVVTHFVADHNHELA 185 9**************99996666.9999999**999877766789999************987677789************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 813 aa Download sequence
MARAEVKREG DNYDIPNEAD DIRLMNESRV KPYHGCEASL NNEEATNMNV EDGGADVKKE 60 MVDDAHGNDM VGDVERAILE QKFDSVKDEK AFYNAYAKTK GFSIRKSRFN INKEEKVVSK 120 LWLCSREGQT LPIYLDRVAK KSRAPKALTR IGCKAQFRIR YDADAGEGGK YVVTHFVADH 180 NHELAKQHCV MYLRSYRSLN SADKAQAMAM RNVGVKTSQI MDYMVNQSGS YENVGFVRTD 240 LHSHIQAERR AEVEDNSKLQ ADYAKFGDVL IFDSTYRTNA YQKPFVMLAG VTSHFRTTIF 300 ACVLLANETI ETYTWVLETF IEAMGNKAPV SVLTDGDKAM REAIRRVFPD VRHRLCNWHL 360 GKNTISNVQI SGFAHAFKQC MDMETDETKF EHGWTTMVEK FGLQTNNWVL ETYEKRHMWA 420 EAYMRRYCFA GMKSTQRSEC MNAYFNPFLQ HKLKLYKFVR HYDRALARIR YNEAGDDAET 480 NNTFPVLITS LRDIERHGAE RFTRNIFRMF RDEILEEGKL NVKDVFPLPD GQKCYYIHKY 540 KVKDISWIVT HSPVDAAMRC SCMKFESLGL PCCHMICVMK VENLTQILPT CVMHRWTRAA 600 SKDGQQWPQP SIDSTTTQTA WYGILSSSYN EMCFYASQST EGFKEARDAC LPMTSRMKEL 660 YERNLNDGNG DKGKHSFPQQ FGVEDPDVVK TKGNPGRALS NCRRPRKCGN CKCIGHTKRT 720 CPKVRFSRIV GTNSDADTPH ITDREYNAES LPVRCKTGLV NPSTPHIKQR RLFFDVSPDS 780 KQPAGQYGSV EAAVCKNDST TIDEVNQVDS TSY

Sequence ? help Back to Top

Protein Sequence Length: 813 aa Download sequence

MARAEVKREG DNYDIPNEAD DIRLMNESRV KPYHGCEASL NNEEATNMNV EDGGADVKKE  60
MVDDAHGNDM VGDVERAILE QKFDSVKDEK AFYNAYAKTK GFSIRKSRFN INKEEKVVSK  120
LWLCSREGQT LPIYLDRVAK KSRAPKALTR IGCKAQFRIR YDADAGEGGK YVVTHFVADH  180
NHELAKQHCV MYLRSYRSLN SADKAQAMAM RNVGVKTSQI MDYMVNQSGS YENVGFVRTD  240
LHSHIQAERR AEVEDNSKLQ ADYAKFGDVL IFDSTYRTNA YQKPFVMLAG VTSHFRTTIF  300
ACVLLANETI ETYTWVLETF IEAMGNKAPV SVLTDGDKAM REAIRRVFPD VRHRLCNWHL  360
GKNTISNVQI SGFAHAFKQC MDMETDETKF EHGWTTMVEK FGLQTNNWVL ETYEKRHMWA  420
EAYMRRYCFA GMKSTQRSEC MNAYFNPFLQ HKLKLYKFVR HYDRALARIR YNEAGDDAET  480
NNTFPVLITS LRDIERHGAE RFTRNIFRMF RDEILEEGKL NVKDVFPLPD GQKCYYIHKY  540
KVKDISWIVT HSPVDAAMRC SCMKFESLGL PCCHMICVMK VENLTQILPT CVMHRWTRAA  600
SKDGQQWPQP SIDSTTTQTA WYGILSSSYN EMCFYASQST EGFKEARDAC LPMTSRMKEL  660
YERNLNDGNG DKGKHSFPQQ FGVEDPDVVK TKGNPGRALS NCRRPRKCGN CKCIGHTKRT  720
CPKVRFSRIV GTNSDADTPH ITDREYNAES LPVRCKTGLV NPSTPHIKQR RLFFDVSPDS  780
KQPAGQYGSV EAAVCKNDST TIDEVNQVDS TSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-85	FAR1 family protein