PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028122685.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | B3 | ||||||||
Protein Properties | Length: 540aa MW: 60684.1 Da PI: 7.4107 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 58.3 | 1.4e-18 | 32 | 122 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ffk++ + s+ l lp kfa++ +++ +++ +led sg++W+v+l +k++g+ +++GW F ++gL+ gDfv+F+++++s f vv XP_028122685.1 32 FFKIM--IGDNFSKVLFLPPKFARTVsDLI---EQKTQLEDASGQRWTVTL--SKYDGSLAFQQGWPAFSLEHGLEIGDFVLFHYIEQSHF--VV 117 67777..334444569*******9996555...3479**************..*********************************98999..99 PP EEE-S CS B3 95 kvfrk 99 +++ k XP_028122685.1 118 QIYGK 122 99876 PP | |||||||
2 | B3 | 37.3 | 4.9e-12 | 474 | 531 | 31 | 90 |
.--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 31 eesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 e+++ + l+d+ +r W v + k+g vl++GW+ F+kan++++gD + F+ ++ se XP_028122685.1 474 ERKVLVCLRDPVSRLWPVIY--HEKQGIKVLASGWEAFCKANRIQVGDECAFEIEDVSEC 531 4678899*************..9999999************************7655544 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 540 aa Download sequence |
MDCPIPACAK CTLNCLLIHG KNKDPSTVAT SFFKIMIGDN FSKVLFLPPK FARTVSDLIE 60 QKTQLEDASG QRWTVTLSKY DGSLAFQQGW PAFSLEHGLE IGDFVLFHYI EQSHFVVQIY 120 GKSGCEKLYF SKENSNQKKR TRANRDSSAK DEQCHTIDNV SINSMNKEGS NTSAVSGSDI 180 DISRRLPMAT TYTTSNIDNV NERLHHVPRT KCIEEPFYMI DRDSGVGQVD RLSALYDLAN 240 FEMQRTSSVG GTKEVLIEDV RPLSHVNTMP QSQAEAEIVD KLPVTEEVVS QTTLSDVPNL 300 PIVEKNKEFQ MMDNVSNQEL GNGNTSGRER RSKTRYSNNK ALISQKDTSL MESSLSMQQK 360 FAGVSKFCEF AASVQTQNCQ SGERMKVVKK EQVEMRPRKM IHGKYPEIKE CDRSSSPSMK 420 DNDHIYKVVK TEPVDATSAL SVKIPFLAVT GGLSFLELPN CLPSVSFRGR PIMERKVLVC 480 LRDPVSRLWP VIYHEKQGIK VLASGWEAFC KANRIQVGDE CAFEIEDVSE CIYKVSVDRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18960.1 | 2e-14 | B3 family protein |