PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028119608.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 381aa MW: 42010.5 Da PI: 4.8389

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028119608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	77.9	2.3e-24	4	125	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 p Gf+F P+d+el+ +yL +k ++++l++++vik+ d+y eP+++ ae + y F+ +kk+++g r r++ +g+Wk +k++++ XP_028119608.1 4 PLGFKFFPSDQELI-HYLLQKSTARPLPCDNVIKDYDLYGEkEPSTIFDG--AEANIHYIFTILKKKTKKGARVDRTAGTGTWKGVDASKSIYDG 95 89**********.9*********999**96449632..3445669******************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++l+g kk +v+ ++++ +k W m ey+l XP_028119608.1 96 NRRLIGSKKNFVYLTNSK---TKGGWNMVEYNL 125 **********5444...568*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MTIPLGFKFF PSDQELIHYL LQKSTARPLP CDNVIKDYDL YGEKEPSTIF DGAEANIHYI 60 FTILKKKTKK GARVDRTAGT GTWKGVDASK SIYDGNRRLI GSKKNFVYLT NSKTKGGWNM 120 VEYNLDGIAE KHALKLGKVT DYVICRVTKN AISKNRIREE GQVMLRMPEQ EEMEGGPPIS 180 KEINNTTIRS TSGAYQVVEY LDNRAYMDTG SAMVSTMAML PAPQQIEGGP TMVVPSSQEI 240 NNTFSDAYQV EEHLANSAYA DIGSATAQLA SYQEMKEGPP ISQENNRMII GSTSGTYQAE 300 EHAHTGTESI MAQLPSSSTP PLSNAPQPSM DMNMNMMMGF GSTFDLDIDM FLANALEPSS 360 GMMMGFGSAF NQEDIDSFLA Y

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MTIPLGFKFF PSDQELIHYL LQKSTARPLP CDNVIKDYDL YGEKEPSTIF DGAEANIHYI  60
FTILKKKTKK GARVDRTAGT GTWKGVDASK SIYDGNRRLI GSKKNFVYLT NSKTKGGWNM  120
VEYNLDGIAE KHALKLGKVT DYVICRVTKN AISKNRIREE GQVMLRMPEQ EEMEGGPPIS  180
KEINNTTIRS TSGAYQVVEY LDNRAYMDTG SAMVSTMAML PAPQQIEGGP TMVVPSSQEI  240
NNTFSDAYQV EEHLANSAYA DIGSATAQLA SYQEMKEGPP ISQENNRMII GSTSGTYQAE  300
EHAHTGTESI MAQLPSSSTP PLSNAPQPSM DMNMNMMMGF GSTFDLDIDM FLANALEPSS  360
GMMMGFGSAF NQEDIDSFLA Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	7e-19	NAC family protein