PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028119397.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 325aa    MW: 36937.3 Da    PI: 5.1139
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028119397.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding582.2e-181461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg WT+eEd +++ +v ++G+g+W+ ++++ g++R++k+c++rw +yl
   XP_028119397.1 14 RGHWTEEEDAKILAYVSKHGTGNWTDVPKKAGLRRCGKSCRLRWTNYL 61
                     899*******************************************97 PP
2Myb_DNA-binding42.61.4e-1369110346
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       +T++E+el++++++  G++ W+ Ia+ +  gRt++++k++w++
   XP_028119397.1  69 TFTPQEEELIIRLHAAIGSR-WSIIAQQLA-GRTDNDVKNYWNT 110
                      69******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MVRPPCCDKL DVRRGHWTEE EDAKILAYVS KHGTGNWTDV PKKAGLRRCG KSCRLRWTNY  60
LRPDLRQETF TPQEEELIIR LHAAIGSRWS IIAQQLAGRT DNDVKNYWNT KLRKKLSEMG  120
IDPVTHKPFS QILADYGNID GLPKFGNRIG SLNRDIKNAF ISKSVQSPIP QHVFSNFNMH  180
FTTLDHPIQN TAGNYANNSS LDLLAQLQSI TLVTEASSNY TNSQTTNTPH VDCSSSSAVS  240
QFNASLSFSW RDFLIEDPFI PGDVQQEEEI KQEEKQDFSA VEEMGHEFEV MNSFESSSCS  300
DRSFVEAMMD QQSDMLLEFP GLMEE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28470.17e-72MYB family protein