PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028117741.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 221aa MW: 25999.5 Da PI: 9.6071

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028117741.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.4	4.3e-22	65	155	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fYn+YAk +GF+vr+s+++ + +n+ + +r++ Cs+eg re++ + e+ r++raetr C a+++v+ +k k++vt+++ eHnH+la XP_028117741.1 65 FYNAYAKVIGFRVRRSRKRITGDNKFVESRKWICSREGVREKKYLQrVERVRTPRAETRLFCSATFRVRYDKtVRKYVVTHFVGEHNHPLA 155 ***************************************9988846777889*************999*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MDEPESSKPE EVNTEIDDQF APDGKDDVVD VKEGLASQTY DSLRMLTKED MLQMKFNSED 60 DAYTFYNAYA KVIGFRVRRS RKRITGDNKF VESRKWICSR EGVREKKYLQ RVERVRTPRA 120 ETRLFCSATF RVRYDKTVRK YVVTHFVGEH NHPLAAPHYV PFLWSHRFVT SADQAQAKAM 180 RNVGMKMSQI MDFMVHQSGG YEKVGFIHRD LHNQFQVERK V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-24	FAR1 family protein