PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028116046.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ZF-HD
Protein Properties Length: 310aa    MW: 34062.9 Da    PI: 8.9374
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028116046.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.19e-3358123358
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegt..........aaalkCaACgCHRnFHRreve 58 
                      v+YkeClkNhAaslGgha+DGCgEfmps+++ +           +++lkCaACgCHRnFHRre +
  XP_028116046.1  58 VVKYKECLKNHAASLGGHALDGCGEFMPSPTTATAtttdnnptdpPNSLKCAACGCHRNFHRREDD 123
                     589**************************9887435799************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MDLTITSITT NTHTPDSENE TPSAPTAPPN NKTISFTNGA LKKHSHHKRR RSPPPVVVVK  60
YKECLKNHAA SLGGHALDGC GEFMPSPTTA TATTTDNNPT DPPNSLKCAA CGCHRNFHRR  120
EDDNPTTTTT HFLDFYRPHH HPLLPLSPTP CRSSPPSSTT SPPPPPPLPQ PSYYSSAPHM  180
LLALSSAAPE DQFMVTPATP TAAKAENPNG RKRFRTKFSQ QQKEKMFSFS DKLGWKMQKC  240
DESLVEEFCN EVGVGKGVLK VWMHNNKHSF AKRDFNSTTI NNNNNNHHHH NEGNNGVHLH  300
VSTNGSSSSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28920.12e-52ZF-HD family protein