PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028115385.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 406aa    MW: 46991.5 Da    PI: 6.653
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028115385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR139.32.1e-123176147
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47
                    +fYn+Y+ ++GFs+r+ + +k+ ++g+it+r fvC+keg+re ++  
  XP_028115385.1 31 NFYNAYGGRMGFSIRRGYVNKN-KEGQITSRLFVCNKEGFRECTHML 76
                    6********************9.6677**************998776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MEPNNVENDG GDCDWKPRVY MTFDTEQEAY NFYNAYGGRM GFSIRRGYVN KNKEGQITSR  60
LFVCNKEGFR ECTHMLPSQR KISASQAAEI DLAEKSGIRL NAAFELMCNE AGGRESLGFT  120
KVDQKNYLRT KRQKSLAYRE AGSILQYFRE KTLENPSFFY SVQLDSEEQI TNIFWTDAQM  180
IMDYRQFGDV VTFDTTYKLN SAHRPFVSFV GFNHHRETVI FGVALMYDET ADSFIWLFRR  240
FLEAMSSKAS KTMFTDQDAA MAKAIPIVIR DQSRGSIPWV CAWEVYGCRR YKELQAEYAL  300
CQKLPRVNIK VKIMEQAADI YTNKIYEEFQ DEYVKSLEVN IEETEICGES TIYKVLDSDG  360
VKVRKVTVEC DGSLTCNCRK FEMKGILCSH CLKILRESLK FKEIPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-52FAR1 family protein