PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028115268.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 769aa MW: 87808.7 Da PI: 6.067

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028115268.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	98.7	6.4e-31	78	165	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s ++s+r+g+i++r+ vCs+eg+r+e ++ k++r+r+ tr+gCka+++vkk+ +gkw vtkl++eHnHel+p XP_028115268.1 78 FYNSYARRVGFSTRVSVYQRSRRDGSIICRQIVCSREGFRREGGEN--KSKRQRTITRVGCKAHITVKKQLSGKWAVTKLVKEHNHELVP 165 9***************************************9988..999***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 769 aa Download sequence
MEFEPINIEN EVIEFDMGSG EEEDEEDADE EEDEDDYDDY NDDMVDHSSV AHNFLFSNAE 60 LEPFEGLEFD SEQASRIFYN SYARRVGFST RVSVYQRSRR DGSIICRQIV CSREGFRREG 120 GENKSKRQRT ITRVGCKAHI TVKKQLSGKW AVTKLVKEHN HELVPPDKVH CLRSHRHVSG 180 PARSLIDTLQ AAGMGPSGVM SVLIRESGGI NNVGFTKVDC QNYMSSSRQR TLGSGGQHVF 240 DYLKRMQAED PGFFCAVQGD FENTSGNILW ADANSRMSYN YFGDTVTFDT TYRTNRYRVP 300 FAPFTGLNHH GQPVLFGCAL LLNESESSFV WLFQTWLAAM SGRHPNSITT DQDRIIRSAV 360 AQVFPGTRHR FCKWNIFREA QEKLSHAYHA YPSFEAEFQR CIDVTETLEE FESCWESLVE 420 RYHLGDNEWL QSMYNSRQQW VPVYLRDTFF GEMSITQSSD SVNSFFDGYI NASTNIHVLI 480 KQYEKAMGSR FEKEVKADYD TINTAPVLKT PSPMEKQAAN LYTRKIFMKF QEELVETLAN 540 PATVIDDKGS EIMYRVAKFG EDHKAQFIRF NVFEKKATCS CQMFEFSGIL CRHILAVFRV 600 TNVLTLPSHY ILQRWTRSAK SGLVLDDHML VLPCNSQESS AARHDNLCRE AIKYVEEGAE 660 SINVYNVAME ALREAAKKVA SAKKNGPGVI QSSLAKEIDQ EVNISENQIG QLQSSSMDKK 720 IQKLTAELEN ASQRCEAYRA KLLDVLKIME EQKLKISVKV QNARLNLRS

Sequence ? help Back to Top

Protein Sequence Length: 769 aa Download sequence

MEFEPINIEN EVIEFDMGSG EEEDEEDADE EEDEDDYDDY NDDMVDHSSV AHNFLFSNAE  60
LEPFEGLEFD SEQASRIFYN SYARRVGFST RVSVYQRSRR DGSIICRQIV CSREGFRREG  120
GENKSKRQRT ITRVGCKAHI TVKKQLSGKW AVTKLVKEHN HELVPPDKVH CLRSHRHVSG  180
PARSLIDTLQ AAGMGPSGVM SVLIRESGGI NNVGFTKVDC QNYMSSSRQR TLGSGGQHVF  240
DYLKRMQAED PGFFCAVQGD FENTSGNILW ADANSRMSYN YFGDTVTFDT TYRTNRYRVP  300
FAPFTGLNHH GQPVLFGCAL LLNESESSFV WLFQTWLAAM SGRHPNSITT DQDRIIRSAV  360
AQVFPGTRHR FCKWNIFREA QEKLSHAYHA YPSFEAEFQR CIDVTETLEE FESCWESLVE  420
RYHLGDNEWL QSMYNSRQQW VPVYLRDTFF GEMSITQSSD SVNSFFDGYI NASTNIHVLI  480
KQYEKAMGSR FEKEVKADYD TINTAPVLKT PSPMEKQAAN LYTRKIFMKF QEELVETLAN  540
PATVIDDKGS EIMYRVAKFG EDHKAQFIRF NVFEKKATCS CQMFEFSGIL CRHILAVFRV  600
TNVLTLPSHY ILQRWTRSAK SGLVLDDHML VLPCNSQESS AARHDNLCRE AIKYVEEGAE  660
SINVYNVAME ALREAAKKVA SAKKNGPGVI QSSLAKEIDQ EVNISENQIG QLQSSSMDKK  720
IQKLTAELEN ASQRCEAYRA KLLDVLKIME EQKLKISVKV QNARLNLRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	129	KSKRQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein