PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028114799.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 487aa MW: 53820 Da PI: 5.982

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028114799.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109	2.5e-34	256	310	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav++LGGse+AtPk +l+lm+v+gLt++hvkSHLQkYR+ XP_028114799.1 256 KPRMRWTPELHESFVEAVNKLGGSERATPKGVLKLMNVEGLTIYHVKSHLQKYRT 310 79****************************************************8 PP
2	Myb_DNA-binding	56.2	7.7e-18	258	309	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m+ +g+t +++ks++qky+ XP_028114799.1 258 RMRWTPELHESFVEAVNKLGGSeraTPKGVLKLMNvEGLTIYHVKSHLQKYR 309 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MTKMDMRPPL FLRRSGEKQM SNMGVSGAMS SFPTYSEEKY PKLPDSFQVS SEQEMMTHPI 60 SPLSSPLASK SGAVGHLFSS GSGFSTDVHF SSVSPQARCP GNSPFISQTS SDGASLPAIR 120 SSRSGVRSTQ LINYPKEDND MSWTPDSLHD FLNFPENVHV HNGQVESSTG VMASEDHVKR 180 TDWQEWADQL ITVDDTLDPN WSDILVDDVQ DHPKPKEIEP STDISAHQAQ LHLHQSAPSG 240 ETCRVVSPLA SAAQTKPRMR WTPELHESFV EAVNKLGGSE RATPKGVLKL MNVEGLTIYH 300 VKSHLQKYRT ARYKPESSEG TSEKKSTPVE DITSLDLKTS MGITEALRMQ MEVQKRLHEQ 360 LQIQRNLQLR IEEQGRYLQM MFEKQKRMGD ERLNASSSNS DEPPPPTVMQ SSHANNKLEA 420 SKEEDNINAG SGGSIAGSVP DEISKDSIEK QTEPESKIGK DLNPDAKRPA SPPTKRARGD 480 ETAVLVS

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MTKMDMRPPL FLRRSGEKQM SNMGVSGAMS SFPTYSEEKY PKLPDSFQVS SEQEMMTHPI  60
SPLSSPLASK SGAVGHLFSS GSGFSTDVHF SSVSPQARCP GNSPFISQTS SDGASLPAIR  120
SSRSGVRSTQ LINYPKEDND MSWTPDSLHD FLNFPENVHV HNGQVESSTG VMASEDHVKR  180
TDWQEWADQL ITVDDTLDPN WSDILVDDVQ DHPKPKEIEP STDISAHQAQ LHLHQSAPSG  240
ETCRVVSPLA SAAQTKPRMR WTPELHESFV EAVNKLGGSE RATPKGVLKL MNVEGLTIYH  300
VKSHLQKYRT ARYKPESSEG TSEKKSTPVE DITSLDLKTS MGITEALRMQ MEVQKRLHEQ  360
LQIQRNLQLR IEEQGRYLQM MFEKQKRMGD ERLNASSSNS DEPPPPTVMQ SSHANNKLEA  420
SKEEDNINAG SGGSIAGSVP DEISKDSIEK QTEPESKIGK DLNPDAKRPA SPPTKRARGD  480
ETAVLVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04450.1	6e-93	G2-like family protein