PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114398.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB_related
Protein Properties Length: 457aa    MW: 51647.8 Da    PI: 6.8974
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114398.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding285e-09394449147
                      TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 
                      r++WT+eE+e l+++v+++ +       W++I +        +Rt+ ++k++w+k 
   XP_028114398.1 394 RLPWTAEEEEMLKEGVQKFSTMvnknlPWRKILEFGHhvfdGTRTPDDLKDKWRKI 449
                      89******************88***********9888999**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    
MEKSCGLGPQ GMWGLEDCLE MDWTEKEVCI KCDKGGNLLI CSDCNCPLAV HEECMHCSAQ  60
FDSMGNFYCP YCSYKRATIE TRKARKKAML AKKALSVFLD KGMTNGDPWK QKAERVWRPN  120
PSTVVGDKEH DDTRNRLDGD AVDNHSVQIE ENQREERFDP GIRTSKYFCK GVEASAANEQ  180
NDNVRPNDSG QHRIVIEQQI HPEPVIASGG GGDCSSEEET DHQFEIVHVG KSAQAEHAKL  240
VDDRQNKRVA GSLSASSLEK ETKLDGALHI STEEELDNAG IVEDKGRRRE EEMQEQEQGT  300
TVSSSGGDSM QQEHAKISDL SCGESGDVSP HWRRIKKRNQ NVVQPPNVDR TRQSVRKLSS  360
EAKTNVIHKE KKNATSKSRQ RTPNLGFPNV KRKRLPWTAE EEEMLKEGVQ KFSTMVNKNL  420
PWRKILEFGH HVFDGTRTPD DLKDKWRKIL VKECSTK