PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114334.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YA
Protein Properties Length: 213aa    MW: 23436 Da    PI: 9.4464
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114334.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.91.5e-32116172158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQy++Il+RRq+Rak+e+ +k+ +ksrkpylheSRh+hAlrR+Rg+gGrF
  XP_028114334.1 116 EEPVFVNAKQYHGILRRRQSRAKAESVNKV-TKSRKPYLHESRHQHALRRARGCGGRF 172
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MPSSVHDLSD DSEAEGQQKH SETQVQSSAP VTGMSYPGLT PPNVQYATPP QLGPGNTMGQ  60
AAYPYPDPYY RSIFAPYDTP PYPAQPFPAQ VTQPVVHLQF MGIQQSGVPL PSDAVEEPVF  120
VNAKQYHGIL RRRQSRAKAE SVNKVTKSRK PYLHESRHQH ALRRARGCGG RFLNSKKAES  180
QHQKEAASGD KKSQANINLN CDKNDRAPSE NAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.23e-67NF-YA family protein