PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028111766.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 575aa MW: 66850.2 Da PI: 8.404

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028111766.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	35	4.6e-11	65	130	2	66
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkakl 66 fYn+YAk +GF+vr+s+++ + +n+ + +r++vCs+eg re++ + e +r + +C+ ++ XP_028111766.1 65 FYNAYAKVIGFNVRRSRKRITGDNKFVESRKWVCSREGVREKKYLQhVEWDNRLDKIFWADCRSRM 130 *****************************************9987722333334444555666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence
MDEPESSRHK RVNTEIDDQF APDGKDDVVD VKEGLASQTY DSLRMLTKED VLQMKFNSED 60 DAYTFYNAYA KVIGFNVRRS RKRITGDNKF VESRKWVCSR EGVREKKYLQ HVEWDNRLDK 120 IFWADCRSRM DYAAFGDVLV FDTTDHTNAY KKPFVILAGV SNHFMTTIFE CALLPDETME 180 TYTWVLEMLM EAMDGKRPIS VVTDGDRAMR QYKLENNNWV LDIHLKRDNW AEAYLRGRMF 240 AGMRSTQRVE GMHAYFNIFL NQKVRLYEFV AQYDRALARM RVNEAEIESK TKNSFPILTT 300 PLRSLEKHAA GLFTRKIFSL FRYEIRKEGK LFVMERVQLE DHRTYHFGEY KAPTCTWTVE 360 YFPANITMKC CCLKFESFGI PCYHMIAVMK SEQLMCILPS CVLQRWTRRG RSKCQQPSLT 420 QICSTLTQTT RFGILSSCFS EMSYYASYAD KDFEEAREIA FQLTSQMKKR WAMRKEGNAE 480 AGDRNIAPKL YGVGDPNVVK TKGNPRGTSS MGKPSKPRWC GYCRSIGHTK RTCKKLASSS 540 QREGSNSDSE PFMNTELDPH TDDIDELPNY PNDPV

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence

MDEPESSRHK RVNTEIDDQF APDGKDDVVD VKEGLASQTY DSLRMLTKED VLQMKFNSED  60
DAYTFYNAYA KVIGFNVRRS RKRITGDNKF VESRKWVCSR EGVREKKYLQ HVEWDNRLDK  120
IFWADCRSRM DYAAFGDVLV FDTTDHTNAY KKPFVILAGV SNHFMTTIFE CALLPDETME  180
TYTWVLEMLM EAMDGKRPIS VVTDGDRAMR QYKLENNNWV LDIHLKRDNW AEAYLRGRMF  240
AGMRSTQRVE GMHAYFNIFL NQKVRLYEFV AQYDRALARM RVNEAEIESK TKNSFPILTT  300
PLRSLEKHAA GLFTRKIFSL FRYEIRKEGK LFVMERVQLE DHRTYHFGEY KAPTCTWTVE  360
YFPANITMKC CCLKFESFGI PCYHMIAVMK SEQLMCILPS CVLQRWTRRG RSKCQQPSLT  420
QICSTLTQTT RFGILSSCFS EMSYYASYAD KDFEEAREIA FQLTSQMKKR WAMRKEGNAE  480
AGDRNIAPKL YGVGDPNVVK TKGNPRGTSS MGKPSKPRWC GYCRSIGHTK RTCKKLASSS  540
QREGSNSDSE PFMNTELDPH TDDIDELPNY PNDPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	2e-39	FAR1 family protein