PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028110872.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 282aa MW: 31859.1 Da PI: 8.4442

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028110872.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.4	7.5e-29	30	80	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kprlrWt +LH+rFv+av++LGG++kAtPk++l++m++kgLtl+h+kSHLQ XP_028110872.1 30 KPRLRWTANLHDRFVDAVTKLGGPNKATPKSVLRVMDLKGLTLYHLKSHLQ 80 79************************************************9 PP
2	Myb_DNA-binding	54.5	2.6e-17	32	80	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWT+ +++++vdav++lGg+ t+k++ r m kg+tl+++ks++q XP_028110872.1 32 RLRWTANLHDRFVDAVTKLGGPnkaTPKSVLRVMDlKGLTLYHLKSHLQ 80 89*********************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MSREREREFD DLGVVVGMME SGMVMSRDPK PRLRWTANLH DRFVDAVTKL GGPNKATPKS 60 VLRVMDLKGL TLYHLKSHLQ YGLGQQAKQQ NTLEQNKESN GGFYRDYHMH SSGATTNSSG 120 AKSEPGEVPI AEALRCQIEV QKRLQEHLEV QKKLQMRIEA QGKYLQSILE KAQKSLTLDM 180 NNTISLEATR DQLNNFNLAL SNLMVNMDGE SRNENISEKN IFFIQRKSNG SLCLGEEQEK 240 KDIKFKVEGS CINFDLNTRG SYDFFGANGS ELEVKKTLAY GS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	4e-72	G2-like family protein