PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028110714.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MYB
Protein Properties Length: 317aa    MW: 33928.9 Da    PI: 7.6531
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028110714.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding301.2e-091361447
                     S-HHHHHHHHHHHHHTTTT......-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg......tWktIartmgkgRtlkqcksrwqky 47
                     W +eE++ + +a++++ ++      +W++Ia++++  +t +++k ++q +
   XP_028110714.1 13 WCKEEEKAFENAIAMHWSEddsskeQWDKIASMVP-SKTIEELKQHYQLL 61
                     999********************************.***********965 PP
2Myb_DNA-binding38.82.1e-12147191347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
   XP_028110714.1 147 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 191
                      7*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MSSSSSASAI VVWCKEEEKA FENAIAMHWS EDDSSKEQWD KIASMVPSKT IEELKQHYQL  60
LVDDVAAIEA GHIPVPSYVG EEASSSSSKD HHHGFHGVTN TAVDKRSSCN YGSGFSGLAA  120
VAHDSAGHSG GGKGGSRSEQ ERRKGIPWTE EEHRLFLLGL DKFGKGDWRS ISRNFVISRT  180
PTQVASHAQK YFIRLNSMNR DRRRSSIHDI TSVNGGGGSG DVPIQQPPIT GQQTNPANPT  240
TTSAIGPPPV KHRAPTNMPG LGMYGGAPVG HPVAAPGHMG HMGSAVGTPV MLPPGHHHHP  300
PYVVPVAYPM APPTMHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.11e-75MYB family protein