PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028110647.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRAS | ||||||||
Protein Properties | Length: 594aa MW: 65114.2 Da PI: 5.0874 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 463.1 | 1.6e-141 | 224 | 592 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 lv++L++cAeav++++ +la+al++++ la +++ +m+++a+yf+eALa+r++r l p++ +++ s++ + f+e++P+lkf+h XP_028110647.1 224 LVHTLMACAEAVQQDNVKLAEALVKQIGFLAVSQAGTMRKVATYFAEALARRIYR--------LYPQNPQDSAFSDH--LQIHFYETCPYLKFAH 308 689****************************************************........44555554445555..4456************ PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190 +taNqaIlea+++++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp++R+Tg+g+p++++++ l+e+g++La++Ae+++v+fef+ +va++l+dl+ XP_028110647.1 309 FTANQAILEAFATKKRVHVIDFSMKQGMQWPALMQALALRPGGPPTFRLTGIGPPSHDNTDHLQEVGWKLAQLAETIHVEFEFRGFVANSLADLD 403 *********************************************************************************************** PP GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak........lpr 277 ++L++++gEa+aVn+v++ h+ll++++++e+ vL++vk+++P++++vveqea+hn++ Fl+rf+e+l+yys+lfdsle p+ XP_028110647.1 404 ASMLDLREGEAVAVNSVFEFHQLLARPGAIEK----VLSAVKEMKPEILTVVEQEANHNGPVFLDRFTESLHYYSTLFDSLEGCggggggspSPA 494 ********************************....*********************************************98889999988888 PP GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvS 371 +++++++++++lgr+i+nvvaceg++r+erhetl++Wr+r+++aGF++v+l+++a kqa++ll+ ++ +dgyrvee+ g+l+lgW++rpL+++S XP_028110647.1 495 VNNQDKVMSEVYLGRQICNVVACEGSDRVERHETLAQWRARFGSAGFESVHLGSNAFKQASMLLALFNgGDGYRVEENGGCLMLGWQTRPLIATS 589 88********************************************************************************************* PP GRAS 372 aWr 374 aW+ XP_028110647.1 590 AWK 592 **8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 594 aa Download sequence |
MKREHHQHYP PPPHQDTFCG GGDDGVGSSS GGGGSGKPKT WEEDAGVDEL LAVLGYKVKA 60 SDMADVAQKL EQLEEVMGHA QEDGLSHLAF DTVHYNPSDL SSWLESMITE LNPLPEFPPP 120 VDDPFLAAIE SSSTVTSVDT QNQYNQQNSY GRIFQDSSSD YDLKAIPGKA VYSQIQPPNK 180 RFKPSSPSSS SSVTSSMPLG MWAESIEPTR PMVLVDSQEN GIRLVHTLMA CAEAVQQDNV 240 KLAEALVKQI GFLAVSQAGT MRKVATYFAE ALARRIYRLY PQNPQDSAFS DHLQIHFYET 300 CPYLKFAHFT ANQAILEAFA TKKRVHVIDF SMKQGMQWPA LMQALALRPG GPPTFRLTGI 360 GPPSHDNTDH LQEVGWKLAQ LAETIHVEFE FRGFVANSLA DLDASMLDLR EGEAVAVNSV 420 FEFHQLLARP GAIEKVLSAV KEMKPEILTV VEQEANHNGP VFLDRFTESL HYYSTLFDSL 480 EGCGGGGGGS PSPAVNNQDK VMSEVYLGRQ ICNVVACEGS DRVERHETLA QWRARFGSAG 540 FESVHLGSNA FKQASMLLAL FNGGDGYRVE ENGGCLMLGW QTRPLIATSA WKLS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01570.1 | 0.0 | GRAS family protein |