PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028110481.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

SBP

Protein Properties

Length: 1005aa MW: 111642 Da PI: 6.877

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028110481.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.8	2e-40	153	230	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C++dl++ak+yhrrhkvC++hska+ +lv +++qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ XP_028110481.1 153 VCQVEDCQVDLTNAKDYHRRHKVCDMHSKATRALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNKRRRKTHP 230 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 1005 aa Download sequence
MEAQFGGKAY HLYGPVIPNL KAVGKKSMEW DLNDWKWDGD LLTAAPLNSV PSDCRSRQLF 60 PVVSEIPINT ALSKSSSSCS EETNLGNEKG KRALEKRRRV VVVEDEEFND GAGSLNLKLG 120 GQVYPITEAE MEKSVGKCGK KSKVVASTSN RAVCQVEDCQ VDLTNAKDYH RRHKVCDMHS 180 KATRALVGNV MQRFCQQCSR FHVLQEFDEG KRSCRRRLAG HNKRRRKTHP ENVVSGGSLN 240 DEHGSSYLLI SLLRILSNMH TNSSDQTKDQ DLLSHLLSNL SSLAGSINGT NLSGLLPGSQ 300 DSHNAATCLP TPEKDPLRPN GQCATVSAFE GTEKRTSANN TQDGLLPTPY AIPCPMRDGI 360 PAKASVPENG MGRIKLNDID LNTVYDDSQD CAENLEGYHA PVNLGIGSLD CTLWVPHGSQ 420 KSSPPQMSGI SGSTSTQSPS SSSGEAQSRT DRIVFKLFGK DPSDFPLVLR KQILDWLSHS 480 PTEIESYIRP GCIILTIYLR LGKSTWEELY CDLSSSLTRL LDASIDSFWR TGWVYTRVQQ 540 RAAFIYDGQI VLDTLLPLKC HKNRSILSIK PIAVSFSERA QFLVRGFNLS RSNTRLLCAL 600 EGKYLVQESC SDVMEVGDTF VDGDEIQCLS FSCSIPNVTG RGFIEVEDQS LSNSFFPFIV 660 TEQDVCSEIC TLESAIEVAE IADDIHAESE MIKARNNAMD FIHEMGWLLH RSQLKFRLDH 720 MDPNLDLFSF KRFRWLMEFS IEHDWCAVVK KLLGFAFNGT VDAGEHSSIE LALLDMSLLH 780 RAVRRNCRSM VEVLLRYIPD GVIDKPGSEQ KQHVNVFRPD AIGPGGLTPL HIAAGIDGSE 840 SVLDALTDDP GSVGIEAWKG ARDSMGMTPN DYACLRGYHS YIHLVQMKIN RKKSGNGHVV 900 LEIPGALLES NIKQKLMDVH KSLKVASFHT EKNEMKPIQR DCRLCQQKMP YGSYRTSLAT 960 YRPAMLSMVA IAAVCVCVAL LFKSSPEVDY VFEPFIWERL KYGSS

Sequence ? help Back to Top

Protein Sequence Length: 1005 aa Download sequence

MEAQFGGKAY HLYGPVIPNL KAVGKKSMEW DLNDWKWDGD LLTAAPLNSV PSDCRSRQLF  60
PVVSEIPINT ALSKSSSSCS EETNLGNEKG KRALEKRRRV VVVEDEEFND GAGSLNLKLG  120
GQVYPITEAE MEKSVGKCGK KSKVVASTSN RAVCQVEDCQ VDLTNAKDYH RRHKVCDMHS  180
KATRALVGNV MQRFCQQCSR FHVLQEFDEG KRSCRRRLAG HNKRRRKTHP ENVVSGGSLN  240
DEHGSSYLLI SLLRILSNMH TNSSDQTKDQ DLLSHLLSNL SSLAGSINGT NLSGLLPGSQ  300
DSHNAATCLP TPEKDPLRPN GQCATVSAFE GTEKRTSANN TQDGLLPTPY AIPCPMRDGI  360
PAKASVPENG MGRIKLNDID LNTVYDDSQD CAENLEGYHA PVNLGIGSLD CTLWVPHGSQ  420
KSSPPQMSGI SGSTSTQSPS SSSGEAQSRT DRIVFKLFGK DPSDFPLVLR KQILDWLSHS  480
PTEIESYIRP GCIILTIYLR LGKSTWEELY CDLSSSLTRL LDASIDSFWR TGWVYTRVQQ  540
RAAFIYDGQI VLDTLLPLKC HKNRSILSIK PIAVSFSERA QFLVRGFNLS RSNTRLLCAL  600
EGKYLVQESC SDVMEVGDTF VDGDEIQCLS FSCSIPNVTG RGFIEVEDQS LSNSFFPFIV  660
TEQDVCSEIC TLESAIEVAE IADDIHAESE MIKARNNAMD FIHEMGWLLH RSQLKFRLDH  720
MDPNLDLFSF KRFRWLMEFS IEHDWCAVVK KLLGFAFNGT VDAGEHSSIE LALLDMSLLH  780
RAVRRNCRSM VEVLLRYIPD GVIDKPGSEQ KQHVNVFRPD AIGPGGLTPL HIAAGIDGSE  840
SVLDALTDDP GSVGIEAWKG ARDSMGMTPN DYACLRGYHS YIHLVQMKIN RKKSGNGHVV  900
LEIPGALLES NIKQKLMDVH KSLKVASFHT EKNEMKPIQR DCRLCQQKMP YGSYRTSLAT  960
YRPAMLSMVA IAAVCVCVAL LFKSSPEVDY VFEPFIWERL KYGSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	96	100	KRRRV
2	223	229	KRRRKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein