PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028108771.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 689aa MW: 80073.1 Da PI: 8.062

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028108771.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.8	1.6e-22	29	117	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY++ vGFs+r+++++ksk++g +++r+fvC k+g++e++k+ + ++++ etrt+C+a + ++ ++ +kw+++k++ +Hn l XP_028108771.1 29 EFYNEYGRIVGFSIRRDYHTKSKKDGIMINRKFVCCKKGEKEKDKRY-ITVKHPQHETRTKCNAFMYISFRRdLSKWVLMKFDDNHNYLL 117 6*****************************************999.99999************999899**********765 PP

Sequence ? help Back to Top
Protein Sequence Length: 689 aa Download sequence
MEDSALEKLA NNSMPCVGME FDSEEGAYEF YNEYGRIVGF SIRRDYHTKS KKDGIMINRK 60 FVCCKKGEKE KDKRYITVKH PQHETRTKCN AFMYISFRRD LSKWVLMKFD DNHNYLLHIP 120 QCTHMMPSQR KLCDAQGINV DVANDIGISL KASHDLISAL ARGKEFVGFT REDQKTYLRA 180 KRQRNLQYGE AGSLLRYFQQ QAIENPYFYF AFQLDVDEMI TNIFWADHQI ITDFGISGDV 240 VSFDTTSRTN KEYRPLALFT GFNHFRMTVI FGAALLYDET TTSFEWLFET FLHAMSGKKH 300 VSFFTDQDQA MAKAISKIMP EVFHGLCTFH LMQNALKHLG YLFKGGLKFG CDFKTCIFGY 360 ENEHELVEAW DSLIHKYNLQ ENLWIKKTWE LREKWAHVYM KLVYTARMRS TQLSESLNAE 420 LKRHLKVDHN IVQFFTHFNR VVMDKRSEEV KAIYNSRQRL PRIKLKMSPM LIQVAKLYTP 480 PIFDLFHNEL DISLCCQVKR CHALGREVTY VIGLYGEDRE YIVKCNVEVN KSGGDNICPE 540 IHCTCQKFES FGILYGHAIK ALDRMNIMKI PERYILGRWR LDARDCAIEE TVTVVENDPK 600 LVIAARYRDL CPRMVKLAAR SSEYKPAYQL VDETLKDLCA KVDNTMTSLD SSGTSGSDGN 660 IEVGTKEFVI DPNLQVKMHK FGYITSVET

Sequence ? help Back to Top

Protein Sequence Length: 689 aa Download sequence

MEDSALEKLA NNSMPCVGME FDSEEGAYEF YNEYGRIVGF SIRRDYHTKS KKDGIMINRK  60
FVCCKKGEKE KDKRYITVKH PQHETRTKCN AFMYISFRRD LSKWVLMKFD DNHNYLLHIP  120
QCTHMMPSQR KLCDAQGINV DVANDIGISL KASHDLISAL ARGKEFVGFT REDQKTYLRA  180
KRQRNLQYGE AGSLLRYFQQ QAIENPYFYF AFQLDVDEMI TNIFWADHQI ITDFGISGDV  240
VSFDTTSRTN KEYRPLALFT GFNHFRMTVI FGAALLYDET TTSFEWLFET FLHAMSGKKH  300
VSFFTDQDQA MAKAISKIMP EVFHGLCTFH LMQNALKHLG YLFKGGLKFG CDFKTCIFGY  360
ENEHELVEAW DSLIHKYNLQ ENLWIKKTWE LREKWAHVYM KLVYTARMRS TQLSESLNAE  420
LKRHLKVDHN IVQFFTHFNR VVMDKRSEEV KAIYNSRQRL PRIKLKMSPM LIQVAKLYTP  480
PIFDLFHNEL DISLCCQVKR CHALGREVTY VIGLYGEDRE YIVKCNVEVN KSGGDNICPE  540
IHCTCQKFES FGILYGHAIK ALDRMNIMKI PERYILGRWR LDARDCAIEE TVTVVENDPK  600
LVIAARYRDL CPRMVKLAAR SSEYKPAYQL VDETLKDLCA KVDNTMTSLD SSGTSGSDGN  660
IEVGTKEFVI DPNLQVKMHK FGYITSVET

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-101	FAR1 family protein