PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028108168.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 358aa MW: 41341.9 Da PI: 7.0566

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028108168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.5	2e-22	65	155	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 fYn+YAk +GFsv++s+++ + +n+ + +r++vCs+eg re++ + e+ r++raetr C+a+++v+ +k k++vt+++ eHnH+la XP_028108168.1 65 FYNAYAKVIGFSVQRSRKRITGDNKFVESRKWVCSREGVREKKYLQrVERVRTPRAETRLFCNATFRVRYDKtARKYVVTHFVGEHNHPLA 155 ***************************************9988846777889*************999*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 358 aa Download sequence
MDEPESSRPE EVNTEIDDQF APDGKDDVVD VKEGLASQTY DSLRMLTKED VLQMKFNSED 60 DAYTFYNAYA KVIGFSVQRS RKRITGDNKF VESRKWVCSR EGVREKKYLQ RVERVRTPRA 120 ETRLFCNATF RVRYDKTARK YVVTHFVGEH NHPLAAPHCV PFLWSHRFVT SADQAQAKAM 180 RNVGMKTSQI MDFMVHQSGG YEKVGFIHRD LHNQFQAERK VQLAEGDAEG ALGYLSAKLD 240 ADPLFFFKYN VDKENRLDKI FWADCRSRMD YAAFGDVLVF DTTYRTNAYK KPFVILAGVS 300 NHFMTTIFGC ALLPDETMET YTWVLEMLME AMDGKRPISV ATDGDRAMRQ NLQLILHT

Sequence ? help Back to Top

Protein Sequence Length: 358 aa Download sequence

MDEPESSRPE EVNTEIDDQF APDGKDDVVD VKEGLASQTY DSLRMLTKED VLQMKFNSED  60
DAYTFYNAYA KVIGFSVQRS RKRITGDNKF VESRKWVCSR EGVREKKYLQ RVERVRTPRA  120
ETRLFCNATF RVRYDKTARK YVVTHFVGEH NHPLAAPHCV PFLWSHRFVT SADQAQAKAM  180
RNVGMKTSQI MDFMVHQSGG YEKVGFIHRD LHNQFQAERK VQLAEGDAEG ALGYLSAKLD  240
ADPLFFFKYN VDKENRLDKI FWADCRSRMD YAAFGDVLVF DTTYRTNAYK KPFVILAGVS  300
NHFMTTIFGC ALLPDETMET YTWVLEMLME AMDGKRPISV ATDGDRAMRQ NLQLILHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-57	FAR1 family protein