PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028107948.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HSF

Protein Properties

Length: 352aa MW: 40548.8 Da PI: 5.153

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028107948.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.8	4.1e-34	40	130	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k++++++d+ ++++sws+ g+sfvv+d+ f++++Lp+yFkh+nf+SFvRQLn+YgF+k++ ++ weF+++ F g+++ll++ XP_028107948.1 40 FLTKTFDMVDDPISDHVVSWSRGGHSFVVWDPYAFSSNLLPTYFKHNNFSSFVRQLNTYGFRKIDPDK---------WEFANEGFLSGRRHLLKN 125 9**************************************************************999.........************** PP XXXXX CS HSF_DNA-bind 97 ikrkk 101 ikr+k XP_028107948.1 126 IKRRK 130 *98 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MMNPSYPVKE ECPGSSSSQS GEGPPPQPME GLHDTGPPPF LTKTFDMVDD PISDHVVSWS 60 RGGHSFVVWD PYAFSSNLLP TYFKHNNFSS FVRQLNTYGF RKIDPDKWEF ANEGFLSGRR 120 HLLKNIKRRK VPSQPLPPQQ ALGPCLEVGR FGFDGEIDRL RRDKQVLMME LVKLRQQQQN 180 SRAHLRAMEL RLQGTERKQQ QMMIFLAKAM QNPLFIQQLV QLKEKRKELE DKATKKRQRR 240 PIEQGQSSRS GEGLIKIEPL EFVDPYGFEV SELEALAMEM QGFGSRSRKE REEELEQFEN 300 GGDKELDERF WEELLNEKLD EESGLPGNEE ECEEEDVNVL ANQLGYLGSS PK

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MMNPSYPVKE ECPGSSSSQS GEGPPPQPME GLHDTGPPPF LTKTFDMVDD PISDHVVSWS  60
RGGHSFVVWD PYAFSSNLLP TYFKHNNFSS FVRQLNTYGF RKIDPDKWEF ANEGFLSGRR  120
HLLKNIKRRK VPSQPLPPQQ ALGPCLEVGR FGFDGEIDRL RRDKQVLMME LVKLRQQQQN  180
SRAHLRAMEL RLQGTERKQQ QMMIFLAKAM QNPLFIQQLV QLKEKRKELE DKATKKRQRR  240
PIEQGQSSRS GEGLIKIEPL EFVDPYGFEV SELEALAMEM QGFGSRSRKE REEELEQFEN  300
GGDKELDERF WEELLNEKLD EESGLPGNEE ECEEEDVNVL ANQLGYLGSS PK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	129	LKNIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-107	HSF family protein