PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028107329.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 831aa MW: 96267.9 Da PI: 7.3739

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028107329.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.8	3.6e-23	70	159	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YAk GFs+r+++ +k k+n +++r +vCskeg+r+++ + +e++r++++ tr+gC+a++++k ++ ++k+ev+++ +eHnH++ XP_028107329.1 70 RFYNSYAKVKGFSIRRDQLYKDKNNM-VISRSWVCSKEGYRQSKYLEvEERKREPKQLTRVGCRACFRIKYNRsTSKYEVNEFFKEHNHSM 159 5******************96666.9***********998867888899************999*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 831 aa Download sequence
MEDNTEQHKN NIIYELVDDD GNDGEYNIHN EDDIVNSNNI PTERDIKRLD ELTEKDVFEM 60 TFDSEENGER FYNSYAKVKG FSIRRDQLYK DKNNMVISRS WVCSKEGYRQ SKYLEVEERK 120 REPKQLTRVG CRACFRIKYN RSTSKYEVNE FFKEHNHSMI GPLGVQFLRS HRNVTSADKA 180 QGNAMHHVGM RTSHIMDFAA QQAGGYENVG FIQKDMYNHF GTERRVQVVD GDAKGALAYF 240 CGKEEQDPMF YYKYDVDEEN RLNNLFWTDG GSRTDYLYFG DVLMFDTIYR TNAYNEPFVI 300 LQGVSNHFQT TVFGCALLTS EIVETYIWVL EKFLDAMDHK MPLSVIIDED KAMCRAIKTV 360 MPTARHRLCK WHLKMNALSN IHIEGFLHSF EKCMSMQCTQ EMFELEWKNL VDKYGLHNNK 420 WIADVYCKRT LWAEAYLHGH FFAGAKRTQR YESMNAFLNR FLKVRLRLFE FVRAYDRALA 480 RLRHNEAKAQ SETENITPIL STGMKRIERH AADIFTRAIF FKFREQIKSE QVLFMSGKTD 540 IEDIHVYYLS MYTHPESTWN VQYRPSDHAM KCSCLYIESC GIPCSHMVSI MKMEHLKEIP 600 SSCILQRWTK NVKSSTLLGK TPFPEWVTQT TRFGALSSAC TEMCSYTSHL TNGYEEARDA 660 MTKLTCRMKD LYVQHVERNG TKGKANVEGT CLHFGVSDPP FTKTKGSRSV ANDKFSKPRK 720 CGHCRGTGHT RNKCPKLENE NIDSFPTQDT YVSGASMLHQ EGGFNVDLTF TNSDYNIMGY 780 GSNGHPTFVG TDYNIMRCDS NIYPNFVVRT CSETPDSIYG RVVGGIIDLS K

Sequence ? help Back to Top

Protein Sequence Length: 831 aa Download sequence

MEDNTEQHKN NIIYELVDDD GNDGEYNIHN EDDIVNSNNI PTERDIKRLD ELTEKDVFEM  60
TFDSEENGER FYNSYAKVKG FSIRRDQLYK DKNNMVISRS WVCSKEGYRQ SKYLEVEERK  120
REPKQLTRVG CRACFRIKYN RSTSKYEVNE FFKEHNHSMI GPLGVQFLRS HRNVTSADKA  180
QGNAMHHVGM RTSHIMDFAA QQAGGYENVG FIQKDMYNHF GTERRVQVVD GDAKGALAYF  240
CGKEEQDPMF YYKYDVDEEN RLNNLFWTDG GSRTDYLYFG DVLMFDTIYR TNAYNEPFVI  300
LQGVSNHFQT TVFGCALLTS EIVETYIWVL EKFLDAMDHK MPLSVIIDED KAMCRAIKTV  360
MPTARHRLCK WHLKMNALSN IHIEGFLHSF EKCMSMQCTQ EMFELEWKNL VDKYGLHNNK  420
WIADVYCKRT LWAEAYLHGH FFAGAKRTQR YESMNAFLNR FLKVRLRLFE FVRAYDRALA  480
RLRHNEAKAQ SETENITPIL STGMKRIERH AADIFTRAIF FKFREQIKSE QVLFMSGKTD  540
IEDIHVYYLS MYTHPESTWN VQYRPSDHAM KCSCLYIESC GIPCSHMVSI MKMEHLKEIP  600
SSCILQRWTK NVKSSTLLGK TPFPEWVTQT TRFGALSSAC TEMCSYTSHL TNGYEEARDA  660
MTKLTCRMKD LYVQHVERNG TKGKANVEGT CLHFGVSDPP FTKTKGSRSV ANDKFSKPRK  720
CGHCRGTGHT RNKCPKLENE NIDSFPTQDT YVSGASMLHQ EGGFNVDLTF TNSDYNIMGY  780
GSNGHPTFVG TDYNIMRCDS NIYPNFVVRT CSETPDSIYG RVVGGIIDLS K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-111	FAR1 family protein