PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028107322.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 344aa    MW: 38073.9 Da    PI: 5.1578
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028107322.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.5e-12174217755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++Er+RR+++ ++f  L  ++P +     kK++Ka++L  A++Y+k+Lq
  XP_028107322.1 174 MAERKRREKLSQRFIALSAMVPGL-----KKMDKASVLGDAIKYLKHLQ 217
                     79**********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MDMSLEKWIS ELEMDDYNFL DHCQTYSTEF NSIDDFSQLV NSPGENLQQS SSSESYTSCS  60
TLNLNCTAAA AATAMAGGGG CENGYERPTK QIKTSITEQF SPNFPISFAD FGSLPSSPST  120
NPPENIDNAS EPKDEVVSNG DHASVPLKNN PPKAGQKRSN AITRTPLEVQ DRVMAERKRR  180
EKLSQRFIAL SAMVPGLKKM DKASVLGDAI KYLKHLQEHV KLLEEQINKK SEESVVFVKK  240
SHISGDDDSS SCDENFDGQA LPEIEARISE NHVLIRIHCE KQKGVAVKLL SEIEKIHLSV  300
VNSSFLPFGQ YAMDITVVAQ MDADFSLTVK DLVRKLRSAV LKFM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1176181ERKRRE
2177182RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-58bHLH family protein