PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028107205.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 282aa MW: 31194.7 Da PI: 10.0378 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 345.1 | 1.6e-105 | 1 | 282 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 mdddg + rn+gyyep+ slk +lglqlmss+aerdak+ r++ + + ++++a+++rd m++ +rd+++++ ++k+l XP_028107205.1 1 MDDDGLNMRNWGYYEPT-SLKGHLGLQLMSSMAERDAKPflsgRDHGV-ILSPNGAFHPRDctvseapvhMDY-MRDSWVNH--------RDKFL 84 9*****99********9.***********************8777777.999*********999999999999.99999999........789** PP GAGA_bind 83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177 ++l+ + + vl++ + ++ lq l+++ + +++ + e + + ke + kkr +++pk++k kk+kk ++++k++ XP_028107205.1 85 NMLPGNP--------NFMVLPEPSATHPLQI-----LQPPDTS------NDERVVMEDQGVRKEGGSLKKRTGGSTPKAPKPKKTKKGPSVPKEN 160 ***9554........4778999999998888.....4444333......45567778889999999999999***************99999999 PP GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272 +++ +r+k kk++d+v+ng+++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtttiS+yPLP+stkrrgaRiagrKmSqgafkk+LekL XP_028107205.1 161 GNSSV--QRAKPAKKNMDVVINGIDMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTTISIYPLPMSTKRRGARIAGRKMSQGAFKKVLEKL 253 98888..79************************************************************************************** PP GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301 a+eGy++snp+DL++hWAkHGtnkfvtir XP_028107205.1 254 ASEGYNFSNPIDLRTHWAKHGTNKFVTIR 282 ****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence |
MDDDGLNMRN WGYYEPTSLK GHLGLQLMSS MAERDAKPFL SGRDHGVILS PNGAFHPRDC 60 TVSEAPVHMD YMRDSWVNHR DKFLNMLPGN PNFMVLPEPS ATHPLQILQP PDTSNDERVV 120 MEDQGVRKEG GSLKKRTGGS TPKAPKPKKT KKGPSVPKEN GNSSVQRAKP AKKNMDVVIN 180 GIDMDISGIP IPVCSCTGTP QQCYRWGCGG WQSACCTTTI SIYPLPMSTK RRGARIAGRK 240 MSQGAFKKVL EKLASEGYNF SNPIDLRTHW AKHGTNKFVT IR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14685.1 | 1e-104 | BBR-BPC family protein |