PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028107204.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | BBR-BPC | ||||||||
Protein Properties | Length: 289aa MW: 31897.6 Da PI: 10.0378 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 345 | 1.8e-105 | 8 | 289 | 1 | 301 |
GAGA_bind 1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 mdddg + rn+gyyep+ slk +lglqlmss+aerdak+ r++ + + ++++a+++rd m++ +rd+++++ ++k+l XP_028107204.1 8 MDDDGLNMRNWGYYEPT-SLKGHLGLQLMSSMAERDAKPflsgRDHGV-ILSPNGAFHPRDctvseapvhMDY-MRDSWVNH--------RDKFL 91 9*****99********9.***********************8777777.999*********999999999999.99999999........789** PP GAGA_bind 83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177 ++l+ + + vl++ + ++ lq l+++ + +++ + e + + ke + kkr +++pk++k kk+kk ++++k++ XP_028107204.1 92 NMLPGNP--------NFMVLPEPSATHPLQI-----LQPPDTS------NDERVVMEDQGVRKEGGSLKKRTGGSTPKAPKPKKTKKGPSVPKEN 167 ***9554........4778999999998888.....4444333......45567778889999999999999***************99999999 PP GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272 +++ +r+k kk++d+v+ng+++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtttiS+yPLP+stkrrgaRiagrKmSqgafkk+LekL XP_028107204.1 168 GNSSV--QRAKPAKKNMDVVINGIDMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTTISIYPLPMSTKRRGARIAGRKMSQGAFKKVLEKL 260 98888..79************************************************************************************** PP GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301 a+eGy++snp+DL++hWAkHGtnkfvtir XP_028107204.1 261 ASEGYNFSNPIDLRTHWAKHGTNKFVTIR 289 ****************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 289 aa Download sequence |
MAQSVVSMDD DGLNMRNWGY YEPTSLKGHL GLQLMSSMAE RDAKPFLSGR DHGVILSPNG 60 AFHPRDCTVS EAPVHMDYMR DSWVNHRDKF LNMLPGNPNF MVLPEPSATH PLQILQPPDT 120 SNDERVVMED QGVRKEGGSL KKRTGGSTPK APKPKKTKKG PSVPKENGNS SVQRAKPAKK 180 NMDVVINGID MDISGIPIPV CSCTGTPQQC YRWGCGGWQS ACCTTTISIY PLPMSTKRRG 240 ARIAGRKMSQ GAFKKVLEKL ASEGYNFSNP IDLRTHWAKH GTNKFVTIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G14685.1 | 1e-104 | BBR-BPC family protein |