PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028107203.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family BBR-BPC
Protein Properties Length: 282aa    MW: 31356.8 Da    PI: 9.8996
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028107203.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind345.51.2e-10512821301
       GAGA_bind   1 mdddgsrernkgyyepaaslkenlglqlmssiaerdaki....rernlalsekkaavaerd.........maflqrdkalaernkalverdnkll 82 
                     mdddg + rn+gyye+  slk +lglqlmss+aerd+k+    r++ + + ++++a+++rd         m++  rd+++++        ++k+l
  XP_028107203.1   1 MDDDGLNMRNWGYYEQP-SLKGHLGLQLMSSMAERDTKPflsgRDHGV-ILNPNGAFHPRDcavseapvhMDY-VRDSWVNH--------RDKFL 84 
                     9*****99*******99.***********************8777777.99**********888888888888.77888877........789** PP

       GAGA_bind  83 alllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     ++l+ + +          v ++ + ++ +q      l+++ +       +++  + e + + ke ++ kkr  +++pk++k kk+kk ++++k++
  XP_028107203.1  85 NMLPGNPN--------FMVYPEPSATHPMQI-----LQPPDTS------NDERVVMEDQGVRKEGESLKKRTGGSTPKAPKPKKTKKGPSVPKEN 160
                     ***95544........677899999998888.....4444333......455667778888999999999999**************99999999 PP

       GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
                      +++   +r+k  kk++d+v+ng+++D+s++P+PvCsCtG+++qCY+WG+GGWqSaCCtttiS+yPLP+stkrrgaRiagrKmSqgafkk+LekL
  XP_028107203.1 161 GNSSV--QRAKPAKKNMDVVINGIDMDISGIPIPVCSCTGTPQQCYRWGCGGWQSACCTTTISIYPLPMSTKRRGARIAGRKMSQGAFKKVLEKL 253
                     98888..79************************************************************************************** PP

       GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     a+eGy++snp+DL++hWAkHGtnkfvtir
  XP_028107203.1 254 ASEGYNFSNPIDLRTHWAKHGTNKFVTIR 282
                     ****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDDDGLNMRN WGYYEQPSLK GHLGLQLMSS MAERDTKPFL SGRDHGVILN PNGAFHPRDC  60
AVSEAPVHMD YVRDSWVNHR DKFLNMLPGN PNFMVYPEPS ATHPMQILQP PDTSNDERVV  120
MEDQGVRKEG ESLKKRTGGS TPKAPKPKKT KKGPSVPKEN GNSSVQRAKP AKKNMDVVIN  180
GIDMDISGIP IPVCSCTGTP QQCYRWGCGG WQSACCTTTI SIYPLPMSTK RRGARIAGRK  240
MSQGAFKKVL EKLASEGYNF SNPIDLRTHW AKHGTNKFVT IR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14685.11e-103BBR-BPC family protein