PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028107008.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 221aa    MW: 24783.4 Da    PI: 7.5618
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028107008.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.9e-1067111755
                     HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     + Er+RR+++ ++f+ L++++P+ +     +K +   i+  ++eYI+ L+
  XP_028107008.1  67 QKERKRREKMTEKFSVLQSIVPNlL-----PKATREKIVGDTIEYIQGLE 111
                     57*********************55.....89***************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MKEIKREEEE EEKRISRLLL STMEGYSDSV IPPLTELSPV CGTAIDEKGS SSRKRGRAKA  60
TEIENIQKER KRREKMTEKF SVLQSIVPNL LPKATREKIV GDTIEYIQGL EKERERLENL  120
IKKTLLPESM AATHCANWNS SVDVTVSGGG VVFFGIRLVC RRHLATEIFE VFEKHEAEVL  180
AATFLVDGGH HQQRRLGVTV TAVVGGDGDD VGKIKRDILN L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15373RKRGRAKATEIENIQKERKRR
26974ERKRRE
37075RKRREK