PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028105477.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family BBR-BPC
Protein Properties Length: 239aa    MW: 26302.1 Da    PI: 10.3415
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028105477.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind241.27.1e-7476236136301
       GAGA_bind 136 pieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGW 230
                     + e++++++k+kk+  k++ ++ pk++   +++kks++skk+  k++ ++ +k e+k+ ++v n+  lD s +P+P CsCtG+ r CYkWG+GGW
  XP_028105477.1  76 ESETKPTKVKKKKSAAKSSDQNAPKVS---RTQKKSSASKKT--KKQFEPGTKIERKDPNMVFNEARLDFSVVPPPYCSCTGVARSCYKWGTGGW 165
                     112222222222222222333333333...333323333222..22223679******************************************* PP

       GAGA_bind 231 qSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     qS+CC t+iS yPLP+s+ ++gaR+ grKmS ga+ klL +LaaeG dls+pvDLkdhWA+HGtnkfvti+
  XP_028105477.1 166 QSSCCNTNISEYPLPMSPSKPGARVPGRKMSIGAYGKLLCRLAAEGLDLSHPVDLKDHWARHGTNKFVTIK 236
                     **********************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MKIGAYHNRN PMISDPNTEG SVPHFAWNYP GNIFSATKIG LNPFQASPMD PKPDLFTAIS  60
LHSFAPMTEP AKNDTESETK PTKVKKKKSA AKSSDQNAPK VSRTQKKSSA SKKTKKQFEP  120
GTKIERKDPN MVFNEARLDF SVVPPPYCSC TGVARSCYKW GTGGWQSSCC NTNISEYPLP  180
MSPSKPGARV PGRKMSIGAY GKLLCRLAAE GLDLSHPVDL KDHWARHGTN KFVTIKTIK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
185115KKKKSAAKSSDQNAPKVSRTQKKSSASKKTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35550.33e-56BBR-BPC family protein