PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028102050.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 399aa MW: 44317.8 Da PI: 8.4699

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028102050.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.4	1.3e-32	254	309	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ XP_028102050.1 254 KQRRCWSPELHRRFINALQQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 309 79****************************************************97 PP
2	Myb_DNA-binding	45.1	2.3e-14	256	307	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++++a +qlGg t+k I + m+ g+t ++ks++qky+ XP_028102050.1 256 RRCWSPELHRRFINALQQLGGSqvaTPKQIRELMQvDGLTNDEVKSHLQKYR 307 568***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MGSIPSELSL DVRPTYVPKT ISDFLGELTA IDSVSDRLFR LDDFVQRLDD EMRKIDAFKR 60 ELPLCMLLLN DAIATLKEES KQCRPRNVEP VLEEFIPLKK NCDENEKSEA KKEKDSGGDK 120 MNWMSSVQLW NTDNLKNIDS KTDQKQNSVP KLREGVGEEF RLVIDDPSQS GKNKVGLRAF 180 MPFKTCPVFP ARKEDKELSV AGLSLLTPGI KNSREDVGSN GLSSKNNGST SSTSLNGHSN 240 LRAGLLSQQQ TARKQRRCWS PELHRRFINA LQQLGGSQVA TPKQIRELMQ VDGLTNDEVK 300 SHLQKYRLHT RRFATATAST SANQSMLVLG GLLMPQDQRD ESRKQSSSQS GSPQGPLQSA 360 GNGGGTSTTG GDSMEEEEDE KSESYSWKSR VHRSAKVAV

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MGSIPSELSL DVRPTYVPKT ISDFLGELTA IDSVSDRLFR LDDFVQRLDD EMRKIDAFKR  60
ELPLCMLLLN DAIATLKEES KQCRPRNVEP VLEEFIPLKK NCDENEKSEA KKEKDSGGDK  120
MNWMSSVQLW NTDNLKNIDS KTDQKQNSVP KLREGVGEEF RLVIDDPSQS GKNKVGLRAF  180
MPFKTCPVFP ARKEDKELSV AGLSLLTPGI KNSREDVGSN GLSSKNNGST SSTSLNGHSN  240
LRAGLLSQQQ TARKQRRCWS PELHRRFINA LQQLGGSQVA TPKQIRELMQ VDGLTNDEVK  300
SHLQKYRLHT RRFATATAST SANQSMLVLG GLLMPQDQRD ESRKQSSSQS GSPQGPLQSA  360
GNGGGTSTTG GDSMEEEEDE KSESYSWKSR VHRSAKVAV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	4e-57	G2-like family protein