PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028100083.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 182aa    MW: 20586 Da    PI: 9.9369
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028100083.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.87.1e-0828113888
            FAR1   8 kevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkv.kkekdgkwevtkleleHnHe 88 
                     ++ GF +++++s +    +++ +  +vC ++g+ + +k+      ++k  + + ++++gC  +l+  k++ ++ w+v+     HnH+
  XP_028100083.1  28 RKNGFMIVIKTSDYG-GGHRTPRIFLVCERSGQYKAHKELkgddsSKKIVKITDTKKCGCPFELRTcKLMANDDWMVDVACGMHNHA 113
                     678******999998.5555788899******999887777777666777788899999999997625566***************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MLDLGVLLTT RVFKSKEELL GWVRDAGRKN GFMIVIKTSD YGGGHRTPRI FLVCERSGQY  60
KAHKELKGDD SSKKIVKITD TKKCGCPFEL RTCKLMANDD WMVDVACGMH NHAPTKHFEG  120
HSFAGRLSEE ETSLLVDMSK SMVTPKEILV TLKRKDALNV TTMKTICNVR HRNNVIEKAM  180
RS