PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028099707.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 718aa MW: 83858.8 Da PI: 7.3709

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028099707.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.4	7.5e-21	31	119	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y +++GFs+r+ + +ks ++g+it+r+fvC+keg+ +k++ +++ r+e tgC+a+l++k + +k v++++++HnH ++ XP_028099707.1 31 DFYNTYERRLGFSIRRGYVNKS-KEGQITSRQFVCNKEGFWVVDKRD-PLTKNLRQEVMTGCQARLVIKWNMnIQKIFVSDFVEQHNHIFV 119 6******************9.6666***********99999.899999***********998799***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 718 aa Download sequence
MEPDNHENDR GECDWKPRVR MTFDTEQEAY DFYNTYERRL GFSIRRGYVN KSKEGQITSR 60 QFVCNKEGFW VVDKRDPLTK NLRQEVMTGC QARLVIKWNM NIQKIFVSDF VEQHNHIFVP 120 AECTHMLPPQ RKISASQATE IDLAEKSGIR LNDAFELMGN EVGGRESLGF TKLDPKNYLR 180 TKRKNSLAYG EAGSILQYFR DKSLENPSFF YSVQLDNEEQ ITNIFWADAQ MIMDYGQFGD 240 VVTFDTTYKL HSAHKPFASF VGFNHHKETV IFGAALMYDE TADSFVWLFR RFLEAMSSKA 300 PKTIFMDQDA AIAKAIPIVM PNTTHRLCTW HLMQNALRHA NSIFKDKEMK SVLYTFMYDI 360 EDKKEFMLKW EEMLDKYEVR DNHWLKLTFG VKEKWGWLYV RNAWGAGMSS TQLSESFNAF 420 LKDFIQSDHN LMQSSMHFDR VLSEKRYKDL QAEYALCQKL PRVNIKMKIM EQAADVYTNK 480 IFEEFQDEYV KSLEVNIEEI ENDGESTVYT VLDSNGIKVR KVRQECDDSV TCNCKKFEIK 540 GILCSHYLKI LRERLKLKEI PSQYILKRWT KKARSEKVKD RCGHDIQVDV RLHQTSRYRS 600 LMAIFRSVAC RASESEETYN LTVEKANELI ANIETMLSAK FNMPCSNTIQ QESHPNTCPE 660 SFEVDSVADK NVVQAKGLKR KECTLLKLLP YFQQNNAEFI LNNAEIAAHS CRIMLNLC

Sequence ? help Back to Top

Protein Sequence Length: 718 aa Download sequence

MEPDNHENDR GECDWKPRVR MTFDTEQEAY DFYNTYERRL GFSIRRGYVN KSKEGQITSR  60
QFVCNKEGFW VVDKRDPLTK NLRQEVMTGC QARLVIKWNM NIQKIFVSDF VEQHNHIFVP  120
AECTHMLPPQ RKISASQATE IDLAEKSGIR LNDAFELMGN EVGGRESLGF TKLDPKNYLR  180
TKRKNSLAYG EAGSILQYFR DKSLENPSFF YSVQLDNEEQ ITNIFWADAQ MIMDYGQFGD  240
VVTFDTTYKL HSAHKPFASF VGFNHHKETV IFGAALMYDE TADSFVWLFR RFLEAMSSKA  300
PKTIFMDQDA AIAKAIPIVM PNTTHRLCTW HLMQNALRHA NSIFKDKEMK SVLYTFMYDI  360
EDKKEFMLKW EEMLDKYEVR DNHWLKLTFG VKEKWGWLYV RNAWGAGMSS TQLSESFNAF  420
LKDFIQSDHN LMQSSMHFDR VLSEKRYKDL QAEYALCQKL PRVNIKMKIM EQAADVYTNK  480
IFEEFQDEYV KSLEVNIEEI ENDGESTVYT VLDSNGIKVR KVRQECDDSV TCNCKKFEIK  540
GILCSHYLKI LRERLKLKEI PSQYILKRWT KKARSEKVKD RCGHDIQVDV RLHQTSRYRS  600
LMAIFRSVAC RASESEETYN LTVEKANELI ANIETMLSAK FNMPCSNTIQ QESHPNTCPE  660
SFEVDSVADK NVVQAKGLKR KECTLLKLLP YFQQNNAEFI LNNAEIAAHS CRIMLNLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-116	FAR1 family protein