PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028099381.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 434aa MW: 49547.9 Da PI: 6.3287

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028099381.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.4	1.8e-21	92	185	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+rks+ +++ ++g++++r + Cs+eg+r ++ + +ek++ ++a tr+gCka+++++ + gk++vt+++ +HnHela XP_028099381.1 92 FYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSREGQRLPKYLDhvAEKSKAPKALTRVGCKAQFRIRYDInageGGKYVVTHFVADHNHELA 185 9**************9999.666699999******9998877888999**********99875556689************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MAPAEVKREG DDYDIPSEAN DIRLINESWA EPYHGCEAGP SNEEATNMNV EDGRADVKQE 60 MVDDAHRNDM VGDVEYAILE HKFDSVEDGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR 120 LWLCSREGQR LPKYLDHVAE KSKAPKALTR VGCKAQFRIR YDINAGEGGK YVVTHFVADH 180 NHELAEQHCV MYLRSHRSLN NADKAQAMAM RNVGVKTSKI MDYMVNQSGS YENVNFIGTD 240 LHNHIQAERR AEVDDGDAQD ALVYLCAKLD VDVRFFYKND VCKDNKLQNM FWADSKSRVD 300 CAKFGDVLIF DSTYRTNAYK KPFVMLAGVT NHFRTTIFAC VLLGNETIDT YTWVLETFME 360 AMGNKASVSV LTDGIRRCER QSEEYFQTQD IDYVIGILGK MMFQMFTKVA LHMLSSNAWT 420 WKRIRQSLSM AGRE

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MAPAEVKREG DDYDIPSEAN DIRLINESWA EPYHGCEAGP SNEEATNMNV EDGRADVKQE  60
MVDDAHRNDM VGDVEYAILE HKFDSVEDGE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR  120
LWLCSREGQR LPKYLDHVAE KSKAPKALTR VGCKAQFRIR YDINAGEGGK YVVTHFVADH  180
NHELAEQHCV MYLRSHRSLN NADKAQAMAM RNVGVKTSKI MDYMVNQSGS YENVNFIGTD  240
LHNHIQAERR AEVDDGDAQD ALVYLCAKLD VDVRFFYKND VCKDNKLQNM FWADSKSRVD  300
CAKFGDVLIF DSTYRTNAYK KPFVMLAGVT NHFRTTIFAC VLLGNETIDT YTWVLETFME  360
AMGNKASVSV LTDGIRRCER QSEEYFQTQD IDYVIGILGK MMFQMFTKVA LHMLSSNAWT  420
WKRIRQSLSM AGRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-51	FAR1 family protein