PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028099373.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family bHLH
Protein Properties Length: 312aa    MW: 35545.5 Da    PI: 6.5897
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028099373.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.63.9e-07161198547
                     HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekA 47 
                     h ++Er RR+r +++++ Lr+llP+     +s K+s   i + A
  XP_028099373.1 161 HMINERLRRERQKHSYSGLRSLLPPgT---KSDKNS---IIQVA 198
                     889*********************944...555555...55555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MEEFFQYGSR SPIYWIEDDA LPANQSGFVR CTDKEEVLPV NQSGLVGYTS QEEALPVNQS  60
ALLGYANQEE ALPVKPSAFV RYPNQEEALL GNQSAFALPV KQSAFVRYKE PPILEGGVGS  120
ESWVVKLNNQ SVNKRMIEFL RKNWSPMMES KDSDRERSYR HMINERLRRE RQKHSYSGLR  180
SLLPPGTKSD KNSIIQVAVK EVQVLEKNKA ELERRNREIE AILGAREDRK IEGAKIRLRV  240
ADPSSGIDSM LEVLKCLKNM GSKITAIQSI FSDKELSAVL EIETQIESEE VEKAVQRKLF  300
EVEMKLRTQV PI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166171RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43650.13e-39bHLH family protein