PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028097307.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 336aa    MW: 39092.3 Da    PI: 7.6566
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028097307.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1736.5e-2360148190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++GFs+r+ + +k+ ++g+it+r fvC+keg++  +k++   ++++r+e rtgC+a+l +k ++  +k+ v +++++HnH ++
  XP_028097307.1  60 NFYNAYGGRMGFSIRRGYVNKN-KEGQITSRLFVCYKEGFQGVDKRD-PLTKNPRQEVRTGCQARLIIKWDRnIHKFFVGEFVEQHNHIFV 148
                     6********************9.6677****************9999.999******************999899*************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MAADMETLKQ QIRGKGVAGV GNHMTWHIEM EPNNAENDRG DCDWKPRVHM TFDTEQEAYN  60
FYNAYGGRMG FSIRRGYVNK NKEGQITSRL FVCYKEGFQG VDKRDPLTKN PRQEVRTGCQ  120
ARLIIKWDRN IHKFFVGEFV EQHNHIFVPI ECTHMLPSQR KISASQANEI DLAKKSGIRL  180
NVAFELMGNE ASGRESLGFT KVDQKNYLRT KRQNILAYGE ADSILQYFRE KTLENPSFFY  240
SVQLDNEEQI TNIFWADAQM IMDYGQFGDV VTFDTTYKLN SAHRPFASFV RFNHHRETVI  300
FGVALMYDET VDSFIWLFRR FLEAMSSKAP KIIFTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-69FAR1 family protein