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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_028096036.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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| Family | TCP | ||||||||
| Protein Properties | Length: 141aa MW: 15626.5 Da PI: 10.1982 | ||||||||
| Description | TCP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | TCP | 65.8 | 1.6e-20 | 46 | 96 | 15 | 65 |
TCP 15 vggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt 65
v+gR+ RvR++a+caar+F+L++eLG+ +d++t++WLl p+ +t+
XP_028096036.1 46 VEGRGHRVRVPALCAARIFQLTRELGHRSDGQTVDWLLHHIHPSHLPATDP 96
79*****************************************99999887 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 141 aa Download sequence |
MESQSTCSNS TDQLNRVSAT QLGSDSSKTR KLHSRRRSSP LKKDTVEGRG HRVRVPALCA 60 ARIFQLTREL GHRSDGQTVD WLLHHIHPSH LPATDPNPNP TPLTTTAAAA APSPELDRFP 120 KEGAWVNMSF TSLLLLQEER N |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G27010.1 | 2e-20 | TCP family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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