PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028095954.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HB-other

Protein Properties

Length: 703aa MW: 78451.2 Da PI: 4.5765

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028095954.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	41	3.2e-13	626	673	7	54
--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 7 ftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 f + ++ L + F++n+yp+++++e+LA++ ++t +qV+ WF N R k XP_028095954.1 626 FGEAVTQGLAKSFNENHYPDRAMKEKLATEFEITVKQVSKWFANARWK 673 66778999**************************************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 703 aa Download sequence
MVSSIHCAQE NSETSQSSSP RQTTSIQELE FCCKTLFGEA TEEHPIGTEN VHKGSTKARA 60 AECEYIGIEQ FEPLNEDLTL YLSCEQLGQQ LEDASMYSNS NQLGLLPEDA AGKNLSTKQT 120 MPELNHELVP GSVNKDIWVE KWKTGTVNFQ NVPAEIVTVE SHTFGFEQPG RPSEELTRNS 180 SWEQLQPPQE DERKNYLEQL GVPPEDKVVN TSLEQLEMPP DDATNNPSKS GGRTSGKSTK 240 EKHALRSSVG STRVLRSRLQ EKSKAPEASN NMEEKKKQMK KITLDEFSRL RNRLRYLLDR 300 IGYQQTLIDA YSGKDWRGQS LETKPVELQD AQFEILHCKL KIRHLFQHLD LLTARGKFPA 360 SLFDSEGQID SNDIFCAKCG CKDSPADNDI ILCDGDCEHG PLQFCLEPPL LKEDVPPGDE 420 GWLCPGCDCK VNCIKLLNDS QGTNFSILDT WETVFPLEAS INKDFGLGFS SDDSEENDYD 480 PDPSEVDEKV EGDESSSDDS DFYSASKDFE DSSDDSEDDD YDPTAPDLDE QEAYGNVSCD 540 SSDGLDADGI PKKRRKNNTD KVASASPSGR TPIVEGTNAK DMQHSQGESE HTPKKRAHEG 600 LDVEGTNNSP VKFYERGSNG TSTKRFGEAV TQGLAKSFNE NHYPDRAMKE KLATEFEITV 660 KQVSKWFANA RWKFHHPLPA RQRSTTSGVR KRKSKPDDHQ GSG

Sequence ? help Back to Top

Protein Sequence Length: 703 aa Download sequence

MVSSIHCAQE NSETSQSSSP RQTTSIQELE FCCKTLFGEA TEEHPIGTEN VHKGSTKARA  60
AECEYIGIEQ FEPLNEDLTL YLSCEQLGQQ LEDASMYSNS NQLGLLPEDA AGKNLSTKQT  120
MPELNHELVP GSVNKDIWVE KWKTGTVNFQ NVPAEIVTVE SHTFGFEQPG RPSEELTRNS  180
SWEQLQPPQE DERKNYLEQL GVPPEDKVVN TSLEQLEMPP DDATNNPSKS GGRTSGKSTK  240
EKHALRSSVG STRVLRSRLQ EKSKAPEASN NMEEKKKQMK KITLDEFSRL RNRLRYLLDR  300
IGYQQTLIDA YSGKDWRGQS LETKPVELQD AQFEILHCKL KIRHLFQHLD LLTARGKFPA  360
SLFDSEGQID SNDIFCAKCG CKDSPADNDI ILCDGDCEHG PLQFCLEPPL LKEDVPPGDE  420
GWLCPGCDCK VNCIKLLNDS QGTNFSILDT WETVFPLEAS INKDFGLGFS SDDSEENDYD  480
PDPSEVDEKV EGDESSSDDS DFYSASKDFE DSSDDSEDDD YDPTAPDLDE QEAYGNVSCD  540
SSDGLDADGI PKKRRKNNTD KVASASPSGR TPIVEGTNAK DMQHSQGESE HTPKKRAHEG  600
LDVEGTNNSP VKFYERGSNG TSTKRFGEAV TQGLAKSFNE NHYPDRAMKE KLATEFEITV  660
KQVSKWFANA RWKFHHPLPA RQRSTTSGVR KRKSKPDDHQ GSG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	552	556	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	2e-63	HB-PHD family protein