PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028093885.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 319aa    MW: 36790.4 Da    PI: 6.8564
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028093885.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR173.83.7e-2364152190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++GFs+r+ + +k+ ++g+it+r fvC+keg+r  +k++   ++++r+e rtgC+a+l ++ ++  +k+ v +++++HnH ++
  XP_028093885.1  64 NFYNAYGGRMGFSIRRGYVNKN-KEGQITSRLFVCNKEGFRGVDKRD-PLTKNPRQEVRTGCQARLIIEWDRnIHKFFVGEFVEQHNHIFV 152
                     6********************9.6677*****************999.999******************999899*************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MVKVRKTATG YSHLVDFLTP FFLFFCGVTL HIDMEPNNVE NDGGDRNWKP RVHMTFDTEQ  60
EAYNFYNAYG GRMGFSIRRG YVNKNKEGQI TSRLFVCNKE GFRGVDKRDP LTKNPRQEVR  120
TGCQARLIIE WDRNIHKFFV GEFVEQHNHI FVPTECTHML PSQRKISASQ ATEIDLAEKS  180
GIRLNVAFEL MGNEAGGRES LGFTKVDQKN YLRTKRQNSS AYGEAGSILQ YFREKTLENP  240
SFFYSVQLDS EEQITNIFWA DAQMIMDYGQ FGDVVTFDTT YKLNSAHRPF ASFVGFNHHR  300
ETVIFGVALM YDETADSFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-63FAR1 family protein