PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028092583.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 556aa MW: 64122.8 Da PI: 7.8109

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028092583.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.3	4.9e-08	46	122	10	87
FAR1 10 vGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 GF +++++s +g+ + + C ++g+ ++++k+ ++++ + ++++gC lk kk + d+ w+++ + HnH XP_028092583.1 46 NGFVIVIKTSDAG-GQGKKPRIVLACERSGYYRDTRKN-KEKKMKVGTKKCGCPFALKGKKLStDDDWMLNVVCGAHNH 122 6999999999887.67779999**********9999.888889999******999999************* PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MDDASTQCDI VCSENVMDYT HEFTTEEIFK SREALIKWAQ EVGKINGFVI VIKTSDAGGQ 60 GKKPRIVLAC ERSGYYRDTR KNKEKKMKVG TKKCGCPFAL KGKKLSTDDD WMLNVVCGAH 120 NHLASEHLEG HSYAGRLSKE ETSLVVDMSK SMVRPKEILV TLKQRDALNV TTMKTIYNAR 180 HRHKVIEKTA GRSQIQQLLA QLLVHKYTKW HRCDDTDTIT DLLWAHPVSL DLLRAFPHVL 240 IMDCTYKTNR LPLLEIVGVT STDMTFSVAF AYLGCEREDN YIWVLNILRS IMDESALPEV 300 FVTDKELDLM KAIDRVFPTA RHLLCRWHIS RNVMAKCKKV FETKEKWDKF IMSWNILVLS 360 TTEEEYHQQF LAMNKEFSTY PEALEYVTTI WLDTYKDRFV AAWIDTCMHF GNMTTSRAES 420 SHAKLKSQLG SNEDSFESSW TKIHNLIQLQ HTDIKLSFEK SLTFVQHNFE PSEFMELRGN 480 ISTSALDRIL AETKRANYVG YDVSACGCIL RRTYGLPCAH EIANYMREGR SIPLSCIDPH 540 WRKLDMEFVP KVTPWS

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MDDASTQCDI VCSENVMDYT HEFTTEEIFK SREALIKWAQ EVGKINGFVI VIKTSDAGGQ  60
GKKPRIVLAC ERSGYYRDTR KNKEKKMKVG TKKCGCPFAL KGKKLSTDDD WMLNVVCGAH  120
NHLASEHLEG HSYAGRLSKE ETSLVVDMSK SMVRPKEILV TLKQRDALNV TTMKTIYNAR  180
HRHKVIEKTA GRSQIQQLLA QLLVHKYTKW HRCDDTDTIT DLLWAHPVSL DLLRAFPHVL  240
IMDCTYKTNR LPLLEIVGVT STDMTFSVAF AYLGCEREDN YIWVLNILRS IMDESALPEV  300
FVTDKELDLM KAIDRVFPTA RHLLCRWHIS RNVMAKCKKV FETKEKWDKF IMSWNILVLS  360
TTEEEYHQQF LAMNKEFSTY PEALEYVTTI WLDTYKDRFV AAWIDTCMHF GNMTTSRAES  420
SHAKLKSQLG SNEDSFESSW TKIHNLIQLQ HTDIKLSFEK SLTFVQHNFE PSEFMELRGN  480
ISTSALDRIL AETKRANYVG YDVSACGCIL RRTYGLPCAH EIANYMREGR SIPLSCIDPH  540
WRKLDMEFVP KVTPWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	7e-17	FAR1 family protein