PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028091550.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 383aa MW: 45179.5 Da PI: 8.3533

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028091550.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	86.2	4.8e-27	41	129	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYneY++ vGFs+r+++ +ks+++g +t+r+fvC k+g+re++k+ + +++r+etrt+Cka ++++ ++ +kw v+k++++HnH+l XP_028091550.1 41 EFYNEYGRIVGFSIRRDYCNKSQKDGVMTSRKFVCCKKGEREKDKRY-TMIKNPRSETRTNCKAFMHISFKRdLSKWIVSKFDSNHNHPL 129 6*****************************************999.99***************999799***********99 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MEDSIMDDGG LEGCIEEMGE LAKDKSPYLS MEFPSEEAAY EFYNEYGRIV GFSIRRDYCN 60 KSQKDGVMTS RKFVCCKKGE REKDKRYTMI KNPRSETRTN CKAFMHISFK RDLSKWIVSK 120 FDSNHNHPLH LPQCTHLMPS QRKVCDAQGI NIDIADESGI SLKASHDLIS VITGGKEFVG 180 FTREDQKTYL RAKKRNCVWI LYDETESHWN GYLNIWMQCK EKNLLVFHRS DQSNASECSQ 240 YAWVSWVVTF HLMQNALKHL GYLFKCGSKF SSNLKACIYD YENEHELIEA WNSLIDKYNL 300 QENEWMKRTW RKREQWAHVY MKWVFTGGIR STQLSESLNG TLRGYLKGDH NIVQFFTHFN 360 RIVVDKRMRK FPQYMILDKS CQE

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MEDSIMDDGG LEGCIEEMGE LAKDKSPYLS MEFPSEEAAY EFYNEYGRIV GFSIRRDYCN  60
KSQKDGVMTS RKFVCCKKGE REKDKRYTMI KNPRSETRTN CKAFMHISFK RDLSKWIVSK  120
FDSNHNHPLH LPQCTHLMPS QRKVCDAQGI NIDIADESGI SLKASHDLIS VITGGKEFVG  180
FTREDQKTYL RAKKRNCVWI LYDETESHWN GYLNIWMQCK EKNLLVFHRS DQSNASECSQ  240
YAWVSWVVTF HLMQNALKHL GYLFKCGSKF SSNLKACIYD YENEHELIEA WNSLIDKYNL  300
QENEWMKRTW RKREQWAHVY MKWVFTGGIR STQLSESLNG TLRGYLKGDH NIVQFFTHFN  360
RIVVDKRMRK FPQYMILDKS CQE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-27	FAR1 family protein