PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028091540.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family C2H2
Protein Properties Length: 291aa    MW: 32766.4 Da    PI: 7.3971
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028091540.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.000135678123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C++ F++   L  H+++H
  XP_028091540.1 56 YSCSFCSREFRSAQALGGHMNVH 78
                    99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MEQARYWMWS RRKQSLSSHL QASSTNPLYG DSWEEQAFVE DAAGPLGGCT WPPRSYSCSF  60
CSREFRSAQA LGGHMNVHRR DRARLKQSPP SPHDHEVQVL HHHNPILNHQ YPSQICTMVY  120
NPNPNSDRVV FASPSSSCRV SHAPTQELSN EKTFIPLFSS PILEEHHKKP SIYSPPSWSN  180
QYFHMTDLNN EEKNSKFIGS NSRGMEDCVA EDLSVSLNLV VRRTRPTSSG GQAEAIGCKR  240
RRIDSTPLLS FPKSNSGDGQ HVLPSEALER SSGSVEELDL ELRLGDRPEV K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1239243KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.15e-26C2H2 family protein