PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028089177.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | HB-other | ||||||||
Protein Properties | Length: 493aa MW: 55410.1 Da PI: 6.8924 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.1 | 3.6e-19 | 14 | 69 | 2 | 57 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR+ t++q+e+Le+++++++yps+e+++++A ++gLte+qV+ WF+ rR k+kk XP_028089177.1 14 KKRRFKTPSQVEALEKFYNEHKYPSEEMKADIAGSIGLTEKQVSGWFCHRRLKDKK 69 89999*************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 493 aa Download sequence |
MHSEDDKALP DKSKKRRFKT PSQVEALEKF YNEHKYPSEE MKADIAGSIG LTEKQVSGWF 60 CHRRLKDKKS WYGEAAVNGR QDRSSGIVQD RGSGHRQDSC GSTKPGNNRH FDPKEVESRR 120 LSGQDFSAAD LAYEHGHHPN ENSSEMDDTS SESSLPLQHM IHPQNVDPLD RATSRYVSQN 180 ENITPINSMG IRTRTGPSGY LKVKGPVENT AITAVKRQLG MHYREDGPLL GVEFDLLPPG 240 AFESSIKDPV DEPYYVGDPD LRHSPDVPRI CNQPNSGMPK QRHEAYNSKM SSHDSDLDGT 300 GFKMMGGSDH RENCFGHQSK PKQPLLPNHS NLFPSRKSIE MDEGSAGGMP VYESNKLCKM 360 RAKYDVEGRR IDSGSSHRGH PYGRKVTGGQ TEPWLYNSDD VNLEDSQREH LESKYSNVTL 420 KHSESLDMED RGLSRRMTKV AKRDRNEFPQ QQSARKASMA ETPLWTNQMK RSAVEIPSSF 480 SEDETAETGS SVD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 14 | 19 | KKRRFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G03250.1 | 1e-71 | HB-other family protein |