PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028089175.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HB-other

Protein Properties

Length: 493aa MW: 55410.1 Da PI: 6.8924

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028089175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.1	3.6e-19	14	69	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR+ t++q+e+Le+++++++yps+e+++++A ++gLte+qV+ WF+ rR k+kk XP_028089175.1 14 KKRRFKTPSQVEALEKFYNEHKYPSEEMKADIAGSIGLTEKQVSGWFCHRRLKDKK 69 89999*************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MHSEDDKALP DKSKKRRFKT PSQVEALEKF YNEHKYPSEE MKADIAGSIG LTEKQVSGWF 60 CHRRLKDKKS WYGEAAVNGR QDRSSGIVQD RGSGHRQDSC GSTKPGNNRH FDPKEVESRR 120 LSGQDFSAAD LAYEHGHHPN ENSSEMDDTS SESSLPLQHM IHPQNVDPLD RATSRYVSQN 180 ENITPINSMG IRTRTGPSGY LKVKGPVENT AITAVKRQLG MHYREDGPLL GVEFDLLPPG 240 AFESSIKDPV DEPYYVGDPD LRHSPDVPRI CNQPNSGMPK QRHEAYNSKM SSHDSDLDGT 300 GFKMMGGSDH RENCFGHQSK PKQPLLPNHS NLFPSRKSIE MDEGSAGGMP VYESNKLCKM 360 RAKYDVEGRR IDSGSSHRGH PYGRKVTGGQ TEPWLYNSDD VNLEDSQREH LESKYSNVTL 420 KHSESLDMED RGLSRRMTKV AKRDRNEFPQ QQSARKASMA ETPLWTNQMK RSAVEIPSSF 480 SEDETAETGS SVD

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MHSEDDKALP DKSKKRRFKT PSQVEALEKF YNEHKYPSEE MKADIAGSIG LTEKQVSGWF  60
CHRRLKDKKS WYGEAAVNGR QDRSSGIVQD RGSGHRQDSC GSTKPGNNRH FDPKEVESRR  120
LSGQDFSAAD LAYEHGHHPN ENSSEMDDTS SESSLPLQHM IHPQNVDPLD RATSRYVSQN  180
ENITPINSMG IRTRTGPSGY LKVKGPVENT AITAVKRQLG MHYREDGPLL GVEFDLLPPG  240
AFESSIKDPV DEPYYVGDPD LRHSPDVPRI CNQPNSGMPK QRHEAYNSKM SSHDSDLDGT  300
GFKMMGGSDH RENCFGHQSK PKQPLLPNHS NLFPSRKSIE MDEGSAGGMP VYESNKLCKM  360
RAKYDVEGRR IDSGSSHRGH PYGRKVTGGQ TEPWLYNSDD VNLEDSQREH LESKYSNVTL  420
KHSESLDMED RGLSRRMTKV AKRDRNEFPQ QQSARKASMA ETPLWTNQMK RSAVEIPSSF  480
SEDETAETGS SVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	14	19	KKRRFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	1e-71	HB-other family protein