PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028089174.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

HB-other

Protein Properties

Length: 496aa MW: 55751.4 Da PI: 6.5532

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028089174.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.1	3.6e-19	20	75	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR+ t++q+e+Le+++++++yps+e+++++A ++gLte+qV+ WF+ rR k+kk XP_028089174.1 20 KKRRFKTPSQVEALEKFYNEHKYPSEEMKADIAGSIGLTEKQVSGWFCHRRLKDKK 75 89999*************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MEESCDMHSE DDKALPDKSK KRRFKTPSQV EALEKFYNEH KYPSEEMKAD IAGSIGLTEK 60 QVSGWFCHRR LKDKKSWYGE AAVNGRQDRS SGIVQDRGSG HRQDSCGSTK PGNNRHFDPK 120 EVESRRLSGQ DFSAADLAYE HGHHPNENSS EMDDTSSESS LPLQHMIHPQ NVDPLDRATS 180 RYVSQNENIT PINSMGIRTR TGPSGYLKVK GPVENTAITA VKRQLGMHYR EDGPLLGVEF 240 DLLPPGAFES SIKDPVDEPY YVGDPDLRHS PDVPRICNQP NSGMRHEAYN SKMSSHDSDL 300 DGTGFKMMGG SDHRENCFGH QSKPKQPLLP NHSNLFPSRK SIEMDEGSAG GMPVYESNKL 360 CKMRAKYDVE GRRIDSGSSH RGHPYGRKVT GGQTEPWLYN SDDVNLEDSQ REHLESKYSN 420 VTLKHSESLD MEDRGLSRRM TKVAKRDRNE FPQQQSARKA SMAETPLWTN QMKRSAVEIP 480 SSFSEDETAE TGSSVD

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MEESCDMHSE DDKALPDKSK KRRFKTPSQV EALEKFYNEH KYPSEEMKAD IAGSIGLTEK  60
QVSGWFCHRR LKDKKSWYGE AAVNGRQDRS SGIVQDRGSG HRQDSCGSTK PGNNRHFDPK  120
EVESRRLSGQ DFSAADLAYE HGHHPNENSS EMDDTSSESS LPLQHMIHPQ NVDPLDRATS  180
RYVSQNENIT PINSMGIRTR TGPSGYLKVK GPVENTAITA VKRQLGMHYR EDGPLLGVEF  240
DLLPPGAFES SIKDPVDEPY YVGDPDLRHS PDVPRICNQP NSGMRHEAYN SKMSSHDSDL  300
DGTGFKMMGG SDHRENCFGH QSKPKQPLLP NHSNLFPSRK SIEMDEGSAG GMPVYESNKL  360
CKMRAKYDVE GRRIDSGSSH RGHPYGRKVT GGQTEPWLYN SDDVNLEDSQ REHLESKYSN  420
VTLKHSESLD MEDRGLSRRM TKVAKRDRNE FPQQQSARKA SMAETPLWTN QMKRSAVEIP  480
SSFSEDETAE TGSSVD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	20	25	KKRRFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	4e-72	HB-other family protein