PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028087848.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 366aa    MW: 42738.4 Da    PI: 7.6988
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028087848.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR139.81.5e-123176147
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47
                    +fYn+Y+ ++GFs+r+ + +ks ++g+it+r+fvC+keg+r  +++ 
  XP_028087848.1 31 DFYNTYGGRLGFSIRRGYVNKS-KEGQITSRQFVCNKEGFRVVDNRM 76
                    6********************9.6666*************9776655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    
MEPNNHENDE GECDWKPRVR MTFDTEQEAY DFYNTYGGRL GFSIRRGYVN KSKEGQITSR  60
QFVCNKEGFR VVDNRMYAYV IPSQRKISTS QATEIDLAEK SGIRLNAAFE LMGNEVSGRE  120
SLGFTKLDQK NYLRTKRQNS LAYGEAGSIL QYFRDKSLEN PSFFYSAQLD NEEQITNIFW  180
ADAQMIMDYG QFGDVVTFDT TYKLNSSHRP FASFVGLNHH RETVVFGAAL MYDETADSFV  240
WLFRRFLEAM SSKAPKTIFM NQDAAMAKAI PIVMPNTTHH LCTWHLMQNA LRHANSIFKD  300
KAMKDKGMKS VLYTFMYDIE DKEEFMLKWK EMLDKYEVTD NHWLKLTFRV KEKWGWPSVR  360
NHGVRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-70FAR1 family protein