PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028085640.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family BBR-BPC
Protein Properties Length: 332aa    MW: 37099.2 Da    PI: 9.9201
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028085640.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind384.71.5e-11713321301
       GAGA_bind   1 mdddgsre..rnkg...yye.pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllve 88 
                     mdd+g+re  r+k+   ++  ++ +s+k     q+m+++aerda+i+ernla+sekk a+aerdma lqrd+a+a+rn a++erdn++++l+++e
  XP_028085640.1   1 MDDSGHREngRHKPppgQWLmQHqPSMK-----QIMAIMAERDAAIQERNLAISEKKTALAERDMAMLQRDTAIADRNSAIMERDNAIATLQYRE 90 
                     9999997767777622221122234444.....************************************************************** PP

       GAGA_bind  89 nsla....salpvgvqvlsgtksidslqq.lse.pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     n+++    s +p+g+q+++g+k++++ qq +++ p+++d +++ r++++++a+p++    +a+e +k++   r+k++ke k    +kk++ks kk
  XP_028085640.1  91 NAMNsgnmSPCPPGCQISRGVKHMHHPQQhVHHqPHMGDASYNSRDMQITDAPPMSP---VASEPAKPR---RTKRAKEAKGMTSNKKPSKSSKK 179
                     **99998889******************9644469*****************99665...444455444...33344444444444445566666 PP

       GAGA_bind 178 vkkesader.............................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyP 243
                     vk+e++d +                             sk ++k++d++ln+v++D+s++PvP+CsCtG+lr CYkWGnGGWqS+CCttt+S+yP
  XP_028085640.1 180 VKREGEDLNkmmfgkshdwkseqdmgsgaddlnkqmgvSKPDWKDQDMGLNQVAFDDSSMPVPICSCTGMLRPCYKWGNGGWQSSCCTTTMSMYP 274
                     666666633467777888999************************************************************************** PP

       GAGA_bind 244 LPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     LP+++++r+aR++grKmS++af+klL++LaaeG+dl npvDLkdhWAkHGtn+++ti+
  XP_028085640.1 275 LPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLTNPVDLKDHWAKHGTNRYITIK 332
                     *********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MDDSGHRENG RHKPPPGQWL MQHQPSMKQI MAIMAERDAA IQERNLAISE KKTALAERDM  60
AMLQRDTAIA DRNSAIMERD NAIATLQYRE NAMNSGNMSP CPPGCQISRG VKHMHHPQQH  120
VHHQPHMGDA SYNSRDMQIT DAPPMSPVAS EPAKPRRTKR AKEAKGMTSN KKPSKSSKKV  180
KREGEDLNKM MFGKSHDWKS EQDMGSGADD LNKQMGVSKP DWKDQDMGLN QVAFDDSSMP  240
VPICSCTGML RPCYKWGNGG WQSSCCTTTM SMYPLPAVPN KRHARVGGRK MSGSAFNKLL  300
SRLAAEGHDL TNPVDLKDHW AKHGTNRYIT IK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-147BBR-BPC family protein