PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028083904.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

G2-like

Protein Properties

Length: 367aa MW: 41442.9 Da PI: 8.292

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028083904.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.1	3.6e-32	189	242	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ XP_028083904.1 189 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 242 9****************************************************7 PP
2	Myb_DNA-binding	48.6	1.9e-15	190	241	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ XP_028083904.1 190 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 241 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MELFPAQPDL SLQISPPNSK PTSGCRRAGE EMDLGFWKRD SRNSISSMVK ADTCFELSLS 60 NPRASEPNSD HFRSFQNHNH NQHHHHHHHQ QPQHQLFQHH HLQQQQQGFN CSPEFGFLRP 120 IRGIPVYQNS PSFPFSQQSL DNTTNLSSPT IASTTTTSST QSAFQSHHQG LMRSRFLSRF 180 PAKRSMRAPR MRWTTTLHAR FVHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY 240 RTVKTTDRAA ASSGQSEVYE NGSSGDTSED MMFDVQNPRK SEVSIEQGRP NLNQDKDFHG 300 LWSNSSSREA WLNGKPRDCG GSITSLEKDL DPKCLSYERI SSDVSSSNLS ETSPKKPNLE 360 FTLGTPQ

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MELFPAQPDL SLQISPPNSK PTSGCRRAGE EMDLGFWKRD SRNSISSMVK ADTCFELSLS  60
NPRASEPNSD HFRSFQNHNH NQHHHHHHHQ QPQHQLFQHH HLQQQQQGFN CSPEFGFLRP  120
IRGIPVYQNS PSFPFSQQSL DNTTNLSSPT IASTTTTSST QSAFQSHHQG LMRSRFLSRF  180
PAKRSMRAPR MRWTTTLHAR FVHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY  240
RTVKTTDRAA ASSGQSEVYE NGSSGDTSED MMFDVQNPRK SEVSIEQGRP NLNQDKDFHG  300
LWSNSSSREA WLNGKPRDCG GSITSLEKDL DPKCLSYERI SSDVSSSNLS ETSPKKPNLE  360
FTLGTPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	5e-77	G2-like family protein