PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028083727.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YA
Protein Properties Length: 314aa    MW: 34463 Da    PI: 6.7919
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028083727.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA98.56.8e-31167223158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQy++Il+RR++Rak+e  +kl +k rkpylheSRh hA+rR RgsgGrF
  XP_028083727.1 167 EEPVYVNAKQYHGILRRRESRAKAELARKL-IKVRKPYLHESRHMHAIRRVRGSGGRF 223
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MQSKSESVNQ IEANPYNILP SAACSEPWWR SRNYNHISPT MIGGNTSNSS SVEQSKDGES  60
QSDDGLDEED DAIKESQITS PHSDGNYGQG HQNFQNRTSA IRPMINESLT QPHQLELVGH  120
SIACASNPYL DPYYAGMMAT YGPQPWVPPH LLDMHHARMP LPLEMVEEPV YVNAKQYHGI  180
LRRRESRAKA ELARKLIKVR KPYLHESRHM HAIRRVRGSG GRFVKKSDAE ASKCTAEETG  240
IGSASATSSH SASSSGSEPL RCEAAETQDS HQEEKGSVGH GTCEPRGYAN DGDSSIQQCG  300
SISSKKASQR SLAM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.24e-60NF-YA family protein