PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028083695.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 289aa    MW: 32849.3 Da    PI: 9.0338
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028083695.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1509.7e-1648135191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fY +YAk++GF +  ++++    +g+++     C++  kr+++++   +  +++ +++++Ckak++ +++ dg++++t+++leH+H+l p
  XP_028083695.1  48 EFYAKYAKNLGFVIAYRTQNVG-ADGKVKYFGIECTRVQKRTKKSEV--NPLKPSLSSKIDCKAKVRATLQPDGRYKLTTVVLEHTHDLIP 135
                     6************999887776.8999**********9999998766..9999***********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDIDSNNPTL NGGEEVEEAE NNPSLNESGE IEEPKKGIFF TSKQEVHEFY AKYAKNLGFV  60
IAYRTQNVGA DGKVKYFGIE CTRVQKRTKK SEVNPLKPSL SSKIDCKAKV RATLQPDGRY  120
KLTTVVLEHT HDLIPSDSRH FPMNKRIRTP VKRKLEINDE AGIGVLRNFH SIVVEAGGYE  180
ALTYDERDAR NHIENVRRLR WSHTKLVLAD ARSRAAYKAF RDVISFDTTY LTNKYDMSFA  240
LFVGVNHHGQ SILFGCGLLS NKNTETFVWL FKDWLNCMSA TPPKAIITD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-44FAR1 family protein