PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028082682.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Nin-like

Protein Properties

Length: 751aa MW: 84923.5 Da PI: 4.6423

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028082682.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	52.8	7.9e-17	564	612	4	52
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 isle++ + +++++dAA++Lgv+ ++LKr CR y IkRWP Rk +++ XP_028082682.1 564 GISLEEILQTSEMKLEDAAQSLGVSKSTLKRVCRGYRIKRWPPRKKNKV 612 599******************************************8775 PP

Sequence ? help Back to Top
Protein Sequence Length: 751 aa Download sequence
MADEEEGFFS YFPDDFKEYM YKELNWLPKF YETFMAKYLN GVVFWSREDD EPERLSSTLP 60 DGDIFNLNKI IRDLLCTIIQ HWIGRPILVQ FWAPITTKEG RSFLTTRSQP FSLASLIYDG 120 HDILDIYGLC RYRMICMDSK FDIDLDGGNT CEQHLPARVF KHQFPESTPN VEFYSITEYP 180 QRDDALRCGL RESFAFPVFE SSTQRCVGVM EVVTLEEDLG FLICSSNFLI CSSYFRNDMY 240 IDFEEFGLKC SVVFDHEDME LDEDENEARI IALVEIENVL KMVCDVHDLP LAQAWVPCKV 300 GWPCRALVDG DILGVSCYYK KDDYGEDVDA FRRISSLFHL KNGVGVVGRA LLSTNMIFCR 360 DVTQFSLTEY PLAHYARKAA LSGCFAICLE SNYTGNDVYV LEFFMPMSNN ASEDPHTSLG 420 KILETMRKNF RCLRVASREE LGEELHIEDI TIQNGEKLDP VQIPQTTISL PLLELSQSEV 480 EVMQVDSSDQ QLENAINTGS NVFGTGHNSI AITCTQEKDT VKASKRKGNK SGGTVKASTR 540 KGDKSGGTVK SSDREDNKKG VKIGISLEEI LQTSEMKLED AAQSLGVSKS TLKRVCRGYR 600 IKRWPPRKKN KVVCSQLNES APCVDLEQSS QLYLDDLPSA QPLATIVHTE PHDTTMQDAN 660 VVTIKAKYAE GNAIKFRLSL SSRLIELQQE VAQRLDLEAG TYCVKYKDED GDLILIACDG 720 DLQDYMSVSR SEGKTCIVVL LEPKVPIPDH L

Sequence ? help Back to Top

Protein Sequence Length: 751 aa Download sequence

MADEEEGFFS YFPDDFKEYM YKELNWLPKF YETFMAKYLN GVVFWSREDD EPERLSSTLP  60
DGDIFNLNKI IRDLLCTIIQ HWIGRPILVQ FWAPITTKEG RSFLTTRSQP FSLASLIYDG  120
HDILDIYGLC RYRMICMDSK FDIDLDGGNT CEQHLPARVF KHQFPESTPN VEFYSITEYP  180
QRDDALRCGL RESFAFPVFE SSTQRCVGVM EVVTLEEDLG FLICSSNFLI CSSYFRNDMY  240
IDFEEFGLKC SVVFDHEDME LDEDENEARI IALVEIENVL KMVCDVHDLP LAQAWVPCKV  300
GWPCRALVDG DILGVSCYYK KDDYGEDVDA FRRISSLFHL KNGVGVVGRA LLSTNMIFCR  360
DVTQFSLTEY PLAHYARKAA LSGCFAICLE SNYTGNDVYV LEFFMPMSNN ASEDPHTSLG  420
KILETMRKNF RCLRVASREE LGEELHIEDI TIQNGEKLDP VQIPQTTISL PLLELSQSEV  480
EVMQVDSSDQ QLENAINTGS NVFGTGHNSI AITCTQEKDT VKASKRKGNK SGGTVKASTR  540
KGDKSGGTVK SSDREDNKKG VKIGISLEEI LQTSEMKLED AAQSLGVSKS TLKRVCRGYR  600
IKRWPPRKKN KVVCSQLNES APCVDLEQSS QLYLDDLPSA QPLATIVHTE PHDTTMQDAN  660
VVTIKAKYAE GNAIKFRLSL SSRLIELQQE VAQRLDLEAG TYCVKYKDED GDLILIACDG  720
DLQDYMSVSR SEGKTCIVVL LEPKVPIPDH L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-85	Nin-like family protein