PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028081670.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 657aa MW: 71366 Da PI: 5.8856

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028081670.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	3e-09	401	438	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gLt +qV++WF N R + XP_028081670.1 401 FEHflHPYPKDSDKIMLARQTGLTRSQVSNWFINARVR 438 554459******************************88 PP
2	BELL	127.7	4.2e-41	263	334	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+q+lq+k +kLls+l+eVd+rYkqy++q+q+v+ssF+++ag+g+akpYt+lAl++iSrhFrcL+d i++qi XP_028081670.1 263 EKQDLQNKLTKLLSMLDEVDRRYKQYYHQMQIVVSSFDVIAGCGAAKPYTALALQTISRHFRCLRDTITGQI 334 6899******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 657 aa Download sequence
MATFFPNSND QRYAAPMLYL RESLPSSYSE SPVIPSNMMM YVNNYSSSSG PCTDTLAGNS 60 NDIPPGAASA STPPHQEILS NLGGSRIGEH DFNGWGNGRG EMPFMPPMGS AIGILQGVQN 120 LQGQGLSLSL STQIPSTGQV PSMEYRGPNS GFSSFLNPLS ISGEGLGGNS DSMKPDMSAY 180 GMSSVARIIP NSKYLKAAQQ LLDEVVNVRN ALKQQDSKKG PTNNLKEDDH GGSKNETTLP 240 SGGVSSNPQD SASNSPSELS AAEKQDLQNK LTKLLSMLDE VDRRYKQYYH QMQIVVSSFD 300 VIAGCGAAKP YTALALQTIS RHFRCLRDTI TGQIRVSRRS LGEQDASANG KGVGISRLRY 360 VDQHLRQQRA LQQLGMMQQH AWRPQRGLPE SSVSVLRAWL FEHFLHPYPK DSDKIMLARQ 420 TGLTRSQVSN WFINARVRLW KPMVEEMYKE EAGDAEMDSN SSSEVAPKAM NGDDISASED 480 RGEDLQHGAT STATEQCSTG QQFLDSKHDH VPDLEMLGTT SNTNFQNGTH GGTEIEYGVA 540 KTRPSVDEGS VFPDTIVESD GGTGRYMTSA YHFSELGRFG NGIGVSLTLG LQHCEGGGGI 600 PMSVDQNHHG FVSVRGDEVY NTASSSMGPQ TSDFDTMDSG NRQHRYSSSH LLHDFVA

Sequence ? help Back to Top

Protein Sequence Length: 657 aa Download sequence

MATFFPNSND QRYAAPMLYL RESLPSSYSE SPVIPSNMMM YVNNYSSSSG PCTDTLAGNS  60
NDIPPGAASA STPPHQEILS NLGGSRIGEH DFNGWGNGRG EMPFMPPMGS AIGILQGVQN  120
LQGQGLSLSL STQIPSTGQV PSMEYRGPNS GFSSFLNPLS ISGEGLGGNS DSMKPDMSAY  180
GMSSVARIIP NSKYLKAAQQ LLDEVVNVRN ALKQQDSKKG PTNNLKEDDH GGSKNETTLP  240
SGGVSSNPQD SASNSPSELS AAEKQDLQNK LTKLLSMLDE VDRRYKQYYH QMQIVVSSFD  300
VIAGCGAAKP YTALALQTIS RHFRCLRDTI TGQIRVSRRS LGEQDASANG KGVGISRLRY  360
VDQHLRQQRA LQQLGMMQQH AWRPQRGLPE SSVSVLRAWL FEHFLHPYPK DSDKIMLARQ  420
TGLTRSQVSN WFINARVRLW KPMVEEMYKE EAGDAEMDSN SSSEVAPKAM NGDDISASED  480
RGEDLQHGAT STATEQCSTG QQFLDSKHDH VPDLEMLGTT SNTNFQNGTH GGTEIEYGVA  540
KTRPSVDEGS VFPDTIVESD GGTGRYMTSA YHFSELGRFG NGIGVSLTLG LQHCEGGGGI  600
PMSVDQNHHG FVSVRGDEVY NTASSSMGPQ TSDFDTMDSG NRQHRYSSSH LLHDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	1e-130	TALE family protein