PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028081102.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 659aa MW: 75998.9 Da PI: 7.6453

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028081102.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	33.8	1.1e-10	41	87	1	47
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 +fY+e+++ v Fs+ +++ +ksk+ng +t+r+fvC+keg+re++k+ XP_028081102.1 41 EFYDEFGRIVRFSIIRDYCNKSKKNGVMTSRKFVCYKEGEREKDKRY 87 6******************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 659 aa Download sequence
MEDGIMDDGG LEGCIEELGK LAKDKSPYLS MEFPSEEAAY EFYDEFGRIV RFSIIRDYCN 60 KSKKNGVMTS RKFVCYKEGE REKDKRYTGI NIDIADETGI SLKASHDLIS AIAGGKEFVR 120 FTREDQKTYL HAKRQRNLQY GETGSLLRYF QQQVTENPYF YYAIQLDVDE MITNIFGADH 180 QIITDYGLFG DVVSFNTTFR TNKEYRSLVL FYGFNHFRMT VIFGAALLYD EIAKSFEWLF 240 ETFLDAMLEK KPISFFTDQD QAMAKAISQI MPEVFHGLCT FHLMQNSLKH LGYSFKSGSK 300 FSSDLKACIY AYKNEHELIE AWNSLMINIT CKRMSGWKEL GEKQSSGRMY KQYEEISAIY 360 DFRQKLPRMK LKKSPILIQQ FNELEEVKCV FGLYGNNEEY IVEGRVEVIG LRGEKNCRKI 420 HCTCKKFENF GILCSRAIKA LNKINVIEIP KRYILGQWRL DAKDCQVEEE NFVVDEDDPK 480 LLILVHYRDL CLRMLKLATQ ASVHKPAYQL VDEGIKELCV KVNNLMKGVG NFGTKELDVE 540 DPNFAQVKGI KKKDVGHKGR GRLKPWHEMM NKKIKIISQP TRLSKTIDQS SNTTNVQNSS 600 SSQPQTIGQS SNITNVQNSS LSQPQEISLN LPRHNPMETE FKNESSFDFS IYSQPPPQN

Sequence ? help Back to Top

Protein Sequence Length: 659 aa Download sequence

MEDGIMDDGG LEGCIEELGK LAKDKSPYLS MEFPSEEAAY EFYDEFGRIV RFSIIRDYCN  60
KSKKNGVMTS RKFVCYKEGE REKDKRYTGI NIDIADETGI SLKASHDLIS AIAGGKEFVR  120
FTREDQKTYL HAKRQRNLQY GETGSLLRYF QQQVTENPYF YYAIQLDVDE MITNIFGADH  180
QIITDYGLFG DVVSFNTTFR TNKEYRSLVL FYGFNHFRMT VIFGAALLYD EIAKSFEWLF  240
ETFLDAMLEK KPISFFTDQD QAMAKAISQI MPEVFHGLCT FHLMQNSLKH LGYSFKSGSK  300
FSSDLKACIY AYKNEHELIE AWNSLMINIT CKRMSGWKEL GEKQSSGRMY KQYEEISAIY  360
DFRQKLPRMK LKKSPILIQQ FNELEEVKCV FGLYGNNEEY IVEGRVEVIG LRGEKNCRKI  420
HCTCKKFENF GILCSRAIKA LNKINVIEIP KRYILGQWRL DAKDCQVEEE NFVVDEDDPK  480
LLILVHYRDL CLRMLKLATQ ASVHKPAYQL VDEGIKELCV KVNNLMKGVG NFGTKELDVE  540
DPNFAQVKGI KKKDVGHKGR GRLKPWHEMM NKKIKIISQP TRLSKTIDQS SNTTNVQNSS  600
SSQPQTIGQS SNITNVQNSS LSQPQEISLN LPRHNPMETE FKNESSFDFS IYSQPPPQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-41	FAR1 family protein